9 items (Bacillus subtilis natto) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	yhxB	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (581 aa)
	yktC	Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	glcK	Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	yrbE	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
	spsL	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
	spsK	NAD(P)-dependent oxidoreductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (283 aa)
	spsJ	dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	spsI	Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	idh	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively. (344 aa)

Your Current Organism:

Bacillus subtilis natto

NCBI taxonomy Id: 86029
Other names: B. subtilis subsp. natto, Bacillus subtilis subsp. natto, Bacillus subtilis var. natto

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
glcK	yhxB	AWV81_12925	AWV81_05255	Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938
idh	spsJ	AWV81_21195	AWV81_20175	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
idh	yktC	AWV81_21195	AWV81_08190	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
idh	yrbE	AWV81_21195	AWV81_14140	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.930
spsI	spsJ	AWV81_20180	AWV81_20175	Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
spsI	spsK	AWV81_20180	AWV81_20170	Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)-dependent oxidoreductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.	0.992
spsI	spsL	AWV81_20180	AWV81_20165	Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
spsI	yhxB	AWV81_20180	AWV81_05255	Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
spsJ	idh	AWV81_20175	AWV81_21195	dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	0.446
spsJ	spsI	AWV81_20175	AWV81_20180	dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
spsJ	spsK	AWV81_20175	AWV81_20170	dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)-dependent oxidoreductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.	0.999
spsJ	spsL	AWV81_20175	AWV81_20165	dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
spsJ	yrbE	AWV81_20175	AWV81_14140	dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
spsK	spsI	AWV81_20170	AWV81_20180	NAD(P)-dependent oxidoreductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.	Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
spsK	spsJ	AWV81_20170	AWV81_20175	NAD(P)-dependent oxidoreductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.	dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
spsK	spsL	AWV81_20170	AWV81_20165	NAD(P)-dependent oxidoreductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
spsL	spsI	AWV81_20165	AWV81_20180	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
spsL	spsJ	AWV81_20165	AWV81_20175	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
spsL	spsK	AWV81_20165	AWV81_20170	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)-dependent oxidoreductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.	0.999
yhxB	glcK	AWV81_05255	AWV81_12925	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938