6 items (Cladophialophora carrionii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	CLCR_06193	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (277 aa)
	rrp5	rRNA biogenesis protein rrp5. (1814 aa)
	NEP1	Ribosomal RNA small subunit methyltransferase NEP1. (260 aa)
	sof1	Protein sof1. (398 aa)
	CLCR_04287	CBF domain-containing protein. (293 aa)
	KRR1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (339 aa)

Your Current Organism:

Cladophialophora carrionii

NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLCR_04287	CLCR_06193	A0A1C1CIY3	A0A1C1C712	CBF domain-containing protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
CLCR_04287	KRR1	A0A1C1CIY3	A0A1C1CQZ3	CBF domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
CLCR_04287	NEP1	A0A1C1CIY3	A0A1C1CEQ3	CBF domain-containing protein.	Ribosomal RNA small subunit methyltransferase NEP1.	0.999
CLCR_04287	rrp5	A0A1C1CIY3	A0A1C1C9H2	CBF domain-containing protein.	rRNA biogenesis protein rrp5.	0.999
CLCR_04287	sof1	A0A1C1CIY3	A0A1C1CF89	CBF domain-containing protein.	Protein sof1.	0.999
CLCR_06193	CLCR_04287	A0A1C1C712	A0A1C1CIY3	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	CBF domain-containing protein.	0.999
CLCR_06193	KRR1	A0A1C1C712	A0A1C1CQZ3	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
CLCR_06193	NEP1	A0A1C1C712	A0A1C1CEQ3	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Ribosomal RNA small subunit methyltransferase NEP1.	0.999
CLCR_06193	rrp5	A0A1C1C712	A0A1C1C9H2	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	rRNA biogenesis protein rrp5.	0.999
CLCR_06193	sof1	A0A1C1C712	A0A1C1CF89	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Protein sof1.	0.999
KRR1	CLCR_04287	A0A1C1CQZ3	A0A1C1CIY3	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	CBF domain-containing protein.	0.999
KRR1	CLCR_06193	A0A1C1CQZ3	A0A1C1C712	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
KRR1	NEP1	A0A1C1CQZ3	A0A1C1CEQ3	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Ribosomal RNA small subunit methyltransferase NEP1.	0.999
KRR1	rrp5	A0A1C1CQZ3	A0A1C1C9H2	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	rRNA biogenesis protein rrp5.	0.999
KRR1	sof1	A0A1C1CQZ3	A0A1C1CF89	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Protein sof1.	0.999
NEP1	CLCR_04287	A0A1C1CEQ3	A0A1C1CIY3	Ribosomal RNA small subunit methyltransferase NEP1.	CBF domain-containing protein.	0.999
NEP1	CLCR_06193	A0A1C1CEQ3	A0A1C1C712	Ribosomal RNA small subunit methyltransferase NEP1.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
NEP1	KRR1	A0A1C1CEQ3	A0A1C1CQZ3	Ribosomal RNA small subunit methyltransferase NEP1.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
NEP1	rrp5	A0A1C1CEQ3	A0A1C1C9H2	Ribosomal RNA small subunit methyltransferase NEP1.	rRNA biogenesis protein rrp5.	0.999
NEP1	sof1	A0A1C1CEQ3	A0A1C1CF89	Ribosomal RNA small subunit methyltransferase NEP1.	Protein sof1.	0.999