STRINGSTRING
SLX4 SLX4 CLCR_04565 CLCR_04565 arc1 arc1 ARP2 ARP2 cdc42 cdc42 COF1 COF1 acnA acnA CLCR_02820 CLCR_02820 rac1A rac1A CLCR_09532 CLCR_09532 ARC18 ARC18 CLCR_08449 CLCR_08449 CLCR_08053 CLCR_08053 CLCR_05832 CLCR_05832 ARC15 ARC15 Arpc4 Arpc4 CLCR_02723 CLCR_02723 arc2 arc2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SLX4Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (873 aa)
CLCR_04565ELMO domain-containing protein. (910 aa)
arc1Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. (395 aa)
ARP2Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (391 aa)
cdc42Cell division control protein 42 like protein. (236 aa)
COF1Cofilin; Belongs to the actin-binding proteins ADF family. (152 aa)
acnAActin, gamma. (423 aa)
CLCR_02820Actin associated protein Wsp1. (640 aa)
rac1ARho-related protein rac1A. (178 aa)
CLCR_09532DUF2013 domain-containing protein. (876 aa)
ARC18Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (189 aa)
CLCR_08449Uncharacterized protein. (486 aa)
CLCR_08053Chromatin remodeling complex subunit; Belongs to the actin family. (760 aa)
CLCR_05832Actin-related protein 3; Belongs to the actin family. (439 aa)
ARC15Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development. (191 aa)
Arpc4Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (186 aa)
CLCR_02723Uncharacterized protein. (1088 aa)
arc2Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (385 aa)
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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