(30 nodes) Proteasome complex network (Pyrenophora teres)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTT_00527	AAA domain-containing protein; Belongs to the AAA ATPase family. (393 aa)
	PTT_06586	Proteasome subunit beta. (227 aa)
	PTT_06861	Proteasome subunit beta. (261 aa)
	PTT_06863	Uncharacterized protein. (264 aa)
	PTT_06865	Proteasome subunit beta; Belongs to the peptidase T1B family. (260 aa)
	PTT_07229	AAA domain-containing protein; Belongs to the AAA ATPase family. (439 aa)
	PTT_07356	MPN domain-containing protein. (361 aa)
	PTT_07452	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (882 aa)
	PTT_07888	PCI domain-containing protein. (423 aa)
	PTT_08703	AAA domain-containing protein; Belongs to the AAA ATPase family. (460 aa)
	PTT_08888	Proteasome subunit alpha type. (256 aa)
	PTT_10297	PCI domain-containing protein. (485 aa)
	PTT_10371	Pr_beta_C domain-containing protein. (276 aa)
	PTT_11507	Proteasome subunit alpha type. (271 aa)
	PTT_11976	Ubiquitin carboxyl-terminal hydrolase. (585 aa)
	PTT_12656	Uncharacterized protein. (191 aa)
	PTT_12659	Proteasome subunit alpha type. (296 aa)
	PTT_12884	AAA domain-containing protein; Belongs to the AAA ATPase family. (421 aa)
	PTT_13000	Proteasome subunit alpha type. (253 aa)
	PTT_14044	VWFA domain-containing protein. (292 aa)
	PTT_14525	MPN domain-containing protein. (333 aa)
	PTT_14578	AAA domain-containing protein; Belongs to the AAA ATPase family. (389 aa)
	PTT_16006	Proteasome subunit beta. (283 aa)
	PTT_16156	Proteasome subunit alpha type. (254 aa)
	PTT_17472	PCI domain-containing protein. (383 aa)
	PTT_17557	PCI domain-containing protein. (495 aa)
	PTT_17801	AAA domain-containing protein; Belongs to the AAA ATPase family. (466 aa)
	PTT_17929	PCI domain-containing protein. (351 aa)
	PTT_18110	Proteasome subunit alpha type. (273 aa)
	PTT_19602	Proteasome subunit alpha type. (279 aa)

Your Current Organism:

Pyrenophora teres

NCBI taxonomy Id: 861557
Other names: P. teres f. teres 0-1, Pyrenophora teres f. teres 0-1

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTT_00527	PTT_06586	E3RCJ7	E3RFR9	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome subunit beta.	0.998
PTT_00527	PTT_06861	E3RCJ7	E3RGE0	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome subunit beta.	0.998
PTT_00527	PTT_06863	E3RCJ7	E3RGE2	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.998
PTT_00527	PTT_06865	E3RCJ7	E3RGE4	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
PTT_00527	PTT_07229	E3RCJ7	E3RH64	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PTT_00527	PTT_07356	E3RCJ7	E3RHG9	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.999
PTT_00527	PTT_07452	E3RCJ7	E3RHN3	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
PTT_00527	PTT_07888	E3RCJ7	E3RIL5	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
PTT_00527	PTT_08703	E3RCJ7	E3RKE6	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PTT_00527	PTT_08888	E3RCJ7	E3RKU1	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.999
PTT_00527	PTT_10297	E3RCJ7	E3RNX6	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
PTT_00527	PTT_10371	E3RCJ7	E3RP40	AAA domain-containing protein; Belongs to the AAA ATPase family.	Pr_beta_C domain-containing protein.	0.998
PTT_00527	PTT_11507	E3RCJ7	E3RRP3	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.999
PTT_00527	PTT_11976	E3RCJ7	E3RSR3	AAA domain-containing protein; Belongs to the AAA ATPase family.	Ubiquitin carboxyl-terminal hydrolase.	0.999
PTT_00527	PTT_12656	E3RCJ7	E3RUA5	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.998
PTT_00527	PTT_12659	E3RCJ7	E3RUA8	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.999
PTT_00527	PTT_12884	E3RCJ7	E3RUU4	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PTT_00527	PTT_13000	E3RCJ7	E3RV25	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.999
PTT_00527	PTT_14044	E3RCJ7	E3RXD8	AAA domain-containing protein; Belongs to the AAA ATPase family.	VWFA domain-containing protein.	0.999
PTT_00527	PTT_14525	E3RCJ7	E3RYC5	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.999