(13 nodes) Histone deacetylation, and Set3 complex network (Pyrenophora teres)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTT_10368	F-box domain-containing protein. (422 aa)
	PTT_10583	Uncharacterized protein. (409 aa)
	PTT_11736	Uncharacterized protein. (522 aa)
	PTT_13785	Hist_deacetyl domain-containing protein. (693 aa)
	PTT_14290	SET domain-containing protein. (976 aa)
	PTT_14524	Hist_deacetyl domain-containing protein. (497 aa)
	PTT_15406	Hist_deacetyl domain-containing protein. (903 aa)
	PTT_15936	Uncharacterized protein. (2313 aa)
	PTT_17366	HDAC_interact domain-containing protein. (1599 aa)
	PTT_17367	Thioredoxin-like_fold domain-containing protein. (214 aa)
	PTT_19719	FAS1 domain-containing protein. (206 aa)
	PTT_20134	Uncharacterized protein. (914 aa)
	PTT_20293	Uncharacterized protein. (590 aa)

Your Current Organism:

Pyrenophora teres

NCBI taxonomy Id: 861557
Other names: P. teres f. teres 0-1, Pyrenophora teres f. teres 0-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTT_10368	PTT_10583	E3RP37	E3RPK4	F-box domain-containing protein.	Uncharacterized protein.	0.431
PTT_10368	PTT_13785	E3RP37	E3RWT7	F-box domain-containing protein.	Hist_deacetyl domain-containing protein.	0.545
PTT_10368	PTT_14524	E3RP37	E3RYC4	F-box domain-containing protein.	Hist_deacetyl domain-containing protein.	0.545
PTT_10368	PTT_15406	E3RP37	E3S057	F-box domain-containing protein.	Hist_deacetyl domain-containing protein.	0.457
PTT_10368	PTT_17366	E3RP37	E3S4B2	F-box domain-containing protein.	HDAC_interact domain-containing protein.	0.431
PTT_10368	PTT_17367	E3RP37	E3S4B3	F-box domain-containing protein.	Thioredoxin-like_fold domain-containing protein.	0.431
PTT_10368	PTT_19719	E3RP37	E3S9I8	F-box domain-containing protein.	FAS1 domain-containing protein.	0.431
PTT_10368	PTT_20134	E3RP37	E3SAF0	F-box domain-containing protein.	Uncharacterized protein.	0.677
PTT_10368	PTT_20293	E3RP37	E3SAS0	F-box domain-containing protein.	Uncharacterized protein.	0.608
PTT_10583	PTT_10368	E3RPK4	E3RP37	Uncharacterized protein.	F-box domain-containing protein.	0.431
PTT_10583	PTT_11736	E3RPK4	E3RS84	Uncharacterized protein.	Uncharacterized protein.	0.747
PTT_10583	PTT_13785	E3RPK4	E3RWT7	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.702
PTT_10583	PTT_14524	E3RPK4	E3RYC4	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.702
PTT_10583	PTT_15406	E3RPK4	E3S057	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.603
PTT_10583	PTT_15936	E3RPK4	E3S183	Uncharacterized protein.	Uncharacterized protein.	0.431
PTT_10583	PTT_20134	E3RPK4	E3SAF0	Uncharacterized protein.	Uncharacterized protein.	0.465
PTT_11736	PTT_10583	E3RS84	E3RPK4	Uncharacterized protein.	Uncharacterized protein.	0.747
PTT_11736	PTT_13785	E3RS84	E3RWT7	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.925
PTT_11736	PTT_14290	E3RS84	E3RXV9	Uncharacterized protein.	SET domain-containing protein.	0.490
PTT_11736	PTT_14524	E3RS84	E3RYC4	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.925