(6 nodes) Peptidase activator activity network (Pyrenophora teres)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTT_11065	BRO1 domain-containing protein. (997 aa)
	PTT_06861	Proteasome subunit beta. (261 aa)
	PTT_06844	Uncharacterized protein. (575 aa)
	PTT_17683	Uncharacterized protein. (394 aa)
	PTT_12656	Uncharacterized protein. (191 aa)
	PTT_19068	Uncharacterized protein. (1965 aa)

Your Current Organism:

Pyrenophora teres

NCBI taxonomy Id: 861557
Other names: P. teres f. teres 0-1, Pyrenophora teres f. teres 0-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTT_06861	PTT_12656	E3RGE0	E3RUA5	Proteasome subunit beta.	Uncharacterized protein.	0.999
PTT_06861	PTT_17683	E3RGE0	E3S507	Proteasome subunit beta.	Uncharacterized protein.	0.972
PTT_06861	PTT_19068	E3RGE0	E3S846	Proteasome subunit beta.	Uncharacterized protein.	0.978
PTT_12656	PTT_06861	E3RUA5	E3RGE0	Uncharacterized protein.	Proteasome subunit beta.	0.999
PTT_12656	PTT_17683	E3RUA5	E3S507	Uncharacterized protein.	Uncharacterized protein.	0.966
PTT_12656	PTT_19068	E3RUA5	E3S846	Uncharacterized protein.	Uncharacterized protein.	0.956
PTT_17683	PTT_06861	E3S507	E3RGE0	Uncharacterized protein.	Proteasome subunit beta.	0.972
PTT_17683	PTT_12656	E3S507	E3RUA5	Uncharacterized protein.	Uncharacterized protein.	0.966
PTT_17683	PTT_19068	E3S507	E3S846	Uncharacterized protein.	Uncharacterized protein.	0.865
PTT_19068	PTT_06861	E3S846	E3RGE0	Uncharacterized protein.	Proteasome subunit beta.	0.978
PTT_19068	PTT_12656	E3S846	E3RUA5	Uncharacterized protein.	Uncharacterized protein.	0.956
PTT_19068	PTT_17683	E3S846	E3S507	Uncharacterized protein.	Uncharacterized protein.	0.865