(18 nodes) Proteasome assembly network (Pyrenophora teres)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTT_08679	Uncharacterized protein. (160 aa)
	PTT_07229	AAA domain-containing protein; Belongs to the AAA ATPase family. (439 aa)
	PTT_06875	KH domain-containing protein. (258 aa)
	PTT_05061	ANK_REP_REGION domain-containing protein. (269 aa)
	PTT_04919	Uncharacterized protein. (229 aa)
	PTT_00527	AAA domain-containing protein; Belongs to the AAA ATPase family. (393 aa)
	PTT_17801	AAA domain-containing protein; Belongs to the AAA ATPase family. (466 aa)
	PTT_14044	VWFA domain-containing protein. (292 aa)
	PTT_11681	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1111 aa)
	PTT_12884	AAA domain-containing protein; Belongs to the AAA ATPase family. (421 aa)
	PTT_13000	Proteasome subunit alpha type. (253 aa)
	PTT_14525	MPN domain-containing protein. (333 aa)
	PTT_14578	AAA domain-containing protein; Belongs to the AAA ATPase family. (389 aa)
	PTT_17225	Uncharacterized protein. (1694 aa)
	PTT_10493	ANK_REP_REGION domain-containing protein. (237 aa)
	PTT_10397	Uncharacterized protein. (656 aa)
	PTT_09361	Uncharacterized protein. (91 aa)
	PTT_08703	AAA domain-containing protein; Belongs to the AAA ATPase family. (460 aa)

Your Current Organism:

Pyrenophora teres

NCBI taxonomy Id: 861557
Other names: P. teres f. teres 0-1, Pyrenophora teres f. teres 0-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTT_00527	PTT_04919	E3RCJ7	E3REQ7	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.998
PTT_00527	PTT_05061	E3RCJ7	E3REU1	AAA domain-containing protein; Belongs to the AAA ATPase family.	ANK_REP_REGION domain-containing protein.	0.809
PTT_00527	PTT_07229	E3RCJ7	E3RH64	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PTT_00527	PTT_08703	E3RCJ7	E3RKE6	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PTT_00527	PTT_09361	E3RCJ7	E3RLU4	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.969
PTT_00527	PTT_10397	E3RCJ7	E3RP63	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.809
PTT_00527	PTT_10493	E3RCJ7	E3RPD7	AAA domain-containing protein; Belongs to the AAA ATPase family.	ANK_REP_REGION domain-containing protein.	0.996
PTT_00527	PTT_11681	E3RCJ7	E3RS29	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
PTT_00527	PTT_12884	E3RCJ7	E3RUU4	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PTT_00527	PTT_13000	E3RCJ7	E3RV25	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.999
PTT_00527	PTT_14044	E3RCJ7	E3RXD8	AAA domain-containing protein; Belongs to the AAA ATPase family.	VWFA domain-containing protein.	0.999
PTT_00527	PTT_14525	E3RCJ7	E3RYC5	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.999
PTT_00527	PTT_14578	E3RCJ7	E3RYG4	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PTT_00527	PTT_17225	E3RCJ7	E3S3Y2	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.892
PTT_00527	PTT_17801	E3RCJ7	E3S5A3	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PTT_04919	PTT_00527	E3REQ7	E3RCJ7	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.998
PTT_04919	PTT_05061	E3REQ7	E3REU1	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.619
PTT_04919	PTT_07229	E3REQ7	E3RH64	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.925
PTT_04919	PTT_08703	E3REQ7	E3RKE6	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.998
PTT_04919	PTT_10397	E3REQ7	E3RP63	Uncharacterized protein.	Uncharacterized protein.	0.619