(6 nodes) Proteasome core complex, alpha-subunit complex network (Pyrenophora teres)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTT_16156	Proteasome subunit alpha type. (254 aa)
	PTT_13000	Proteasome subunit alpha type. (253 aa)
	PTT_12659	Proteasome subunit alpha type. (296 aa)
	PTT_11507	Proteasome subunit alpha type. (271 aa)
	PTT_19602	Proteasome subunit alpha type. (279 aa)
	PTT_18110	Proteasome subunit alpha type. (273 aa)

Your Current Organism:

Pyrenophora teres

NCBI taxonomy Id: 861557
Other names: P. teres f. teres 0-1, Pyrenophora teres f. teres 0-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTT_11507	PTT_12659	E3RRP3	E3RUA8	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_11507	PTT_13000	E3RRP3	E3RV25	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_11507	PTT_16156	E3RRP3	E3S1P1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_11507	PTT_18110	E3RRP3	E3S5Z7	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_11507	PTT_19602	E3RRP3	E3S9A5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_12659	PTT_11507	E3RUA8	E3RRP3	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_12659	PTT_13000	E3RUA8	E3RV25	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_12659	PTT_16156	E3RUA8	E3S1P1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_12659	PTT_18110	E3RUA8	E3S5Z7	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_12659	PTT_19602	E3RUA8	E3S9A5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_13000	PTT_11507	E3RV25	E3RRP3	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_13000	PTT_12659	E3RV25	E3RUA8	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_13000	PTT_16156	E3RV25	E3S1P1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_13000	PTT_18110	E3RV25	E3S5Z7	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_13000	PTT_19602	E3RV25	E3S9A5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_16156	PTT_11507	E3S1P1	E3RRP3	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_16156	PTT_12659	E3S1P1	E3RUA8	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_16156	PTT_13000	E3S1P1	E3RV25	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_16156	PTT_18110	E3S1P1	E3S5Z7	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PTT_16156	PTT_19602	E3S1P1	E3S9A5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999