37 items (Pyrenophora teres) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTT_15968	Rhomboid domain-containing protein. (592 aa)
	PTT_16249	Uncharacterized protein. (234 aa)
	PTT_17426	WD_REPEATS_REGION domain-containing protein. (348 aa)
	PTT_17849	FAD-binding FR-type domain-containing protein. (550 aa)
	PTT_17946	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (125 aa)
	PTT_18013	Uncharacterized protein. (831 aa)
	PTT_18788	Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. (572 aa)
	PTT_18798	Uncharacterized protein. (708 aa)
	PTT_18805	ABC transporter domain-containing protein. (630 aa)
	PTT_18821	Uncharacterized protein. (357 aa)
	PTT_19151	Uncharacterized protein. (556 aa)
	PTT_19169	Uncharacterized protein. (519 aa)
	PTT_19186	N-acetyltransferase domain-containing protein. (270 aa)
	PTT_19313	Uncharacterized protein. (203 aa)
	PTT_19794	Uncharacterized protein. (1092 aa)
	PTT_20290	ABC transporter domain-containing protein. (710 aa)
	PTT_19968	PHB domain-containing protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (505 aa)
	PTT_00366	Uncharacterized protein. (880 aa)
	PTT_04960	Uncharacterized protein. (351 aa)
	PTT_06333	ELMO domain-containing protein. (693 aa)
	PTT_06876	Diphthami_syn_2 domain-containing protein. (656 aa)
	PTT_07470	Uncharacterized protein. (361 aa)
	PTT_07471	Uncharacterized protein; Belongs to the multicopper oxidase family. (583 aa)
	PTT_07645	Uncharacterized protein. (345 aa)
	PTT_08144	Glucosamine 6-phosphate N-acetyltransferase; Belongs to the acetyltransferase family. GNA1 subfamily. (170 aa)
	PTT_08744	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (573 aa)
	PTT_08763	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (967 aa)
	PTT_09646	Uncharacterized protein. (665 aa)
	PTT_10754	NodB homology domain-containing protein. (252 aa)
	PTT_11427	Uncharacterized protein. (688 aa)
	PTT_11790	EF-hand domain-containing protein. (2147 aa)
	PTT_11958	G protein gamma domain-containing protein. (97 aa)
	PTT_12290	FKS1_dom1 domain-containing protein. (1942 aa)
	PTT_12592	Uncharacterized protein. (550 aa)
	chy	Cyanide hydratase; Can also transform some nitriles like 2-cyanopyridine and fumaronitrile. (366 aa)
	PTT_13443	FAD-binding FR-type domain-containing protein. (559 aa)
	PTT_14626	Uncharacterized protein. (353 aa)

Your Current Organism:

Pyrenophora teres

NCBI taxonomy Id: 861557
Other names: P. teres f. teres 0-1, Pyrenophora teres f. teres 0-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTT_04960	PTT_07645	E3RET3	E3RI43	Uncharacterized protein.	Uncharacterized protein.	0.613
PTT_04960	PTT_11958	E3RET3	E3RSP9	Uncharacterized protein.	G protein gamma domain-containing protein.	0.505
PTT_04960	PTT_14626	E3RET3	E3RYK0	Uncharacterized protein.	Uncharacterized protein.	0.902
PTT_04960	PTT_17426	E3RET3	E3S4F0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.909
PTT_07470	PTT_07471	E3RHQ1	E3RHQ2	Uncharacterized protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.658
PTT_07471	PTT_07470	E3RHQ2	E3RHQ1	Uncharacterized protein; Belongs to the multicopper oxidase family.	Uncharacterized protein.	0.658
PTT_07645	PTT_04960	E3RI43	E3RET3	Uncharacterized protein.	Uncharacterized protein.	0.613
PTT_07645	PTT_11958	E3RI43	E3RSP9	Uncharacterized protein.	G protein gamma domain-containing protein.	0.827
PTT_07645	PTT_14626	E3RI43	E3RYK0	Uncharacterized protein.	Uncharacterized protein.	0.613
PTT_07645	PTT_17426	E3RI43	E3S4F0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.954
PTT_07645	PTT_19794	E3RI43	E3S9Q4	Uncharacterized protein.	Uncharacterized protein.	0.627
PTT_08763	PTT_17946	E3RKJ8	E3S5M4	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.998
PTT_11790	PTT_19151	E3RSD6	E3S8B2	EF-hand domain-containing protein.	Uncharacterized protein.	0.408
PTT_11958	PTT_04960	E3RSP9	E3RET3	G protein gamma domain-containing protein.	Uncharacterized protein.	0.505
PTT_11958	PTT_07645	E3RSP9	E3RI43	G protein gamma domain-containing protein.	Uncharacterized protein.	0.827
PTT_11958	PTT_14626	E3RSP9	E3RYK0	G protein gamma domain-containing protein.	Uncharacterized protein.	0.505
PTT_11958	PTT_17426	E3RSP9	E3S4F0	G protein gamma domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.995
PTT_11958	PTT_19794	E3RSP9	E3S9Q4	G protein gamma domain-containing protein.	Uncharacterized protein.	0.658
PTT_12592	PTT_13443	E3RU52	E3RW43	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.569
PTT_12592	PTT_17849	E3RU52	E3S5E7	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.618