(5 nodes) Ureohydrolase network (Pyrenophora teres)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTT_05473	Uncharacterized protein; Belongs to the arginase family. (407 aa)
	PTT_17725	Uncharacterized protein; Belongs to the arginase family. (372 aa)
	PTT_14684	Arginase; Belongs to the arginase family. (324 aa)
	PTT_11157	Uncharacterized protein; Belongs to the arginase family. (399 aa)
	PTT_06494	Uncharacterized protein; Belongs to the arginase family. (294 aa)

Your Current Organism:

Pyrenophora teres

NCBI taxonomy Id: 861557
Other names: P. teres f. teres 0-1, Pyrenophora teres f. teres 0-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTT_05473	PTT_11157	E3RF22	E3RQW5	Uncharacterized protein; Belongs to the arginase family.	Uncharacterized protein; Belongs to the arginase family.	0.904
PTT_05473	PTT_17725	E3RF22	E3S549	Uncharacterized protein; Belongs to the arginase family.	Uncharacterized protein; Belongs to the arginase family.	0.903
PTT_06494	PTT_14684	E3RFJ5	E3RYP3	Uncharacterized protein; Belongs to the arginase family.	Arginase; Belongs to the arginase family.	0.908
PTT_11157	PTT_05473	E3RQW5	E3RF22	Uncharacterized protein; Belongs to the arginase family.	Uncharacterized protein; Belongs to the arginase family.	0.904
PTT_11157	PTT_17725	E3RQW5	E3S549	Uncharacterized protein; Belongs to the arginase family.	Uncharacterized protein; Belongs to the arginase family.	0.905
PTT_14684	PTT_06494	E3RYP3	E3RFJ5	Arginase; Belongs to the arginase family.	Uncharacterized protein; Belongs to the arginase family.	0.908
PTT_17725	PTT_05473	E3S549	E3RF22	Uncharacterized protein; Belongs to the arginase family.	Uncharacterized protein; Belongs to the arginase family.	0.903
PTT_17725	PTT_11157	E3S549	E3RQW5	Uncharacterized protein; Belongs to the arginase family.	Uncharacterized protein; Belongs to the arginase family.	0.905