(5 nodes) Peptidase S54, rhomboid domain network (Pyrenophora teres)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTT_17474	Rhomboid domain-containing protein. (263 aa)
	PTT_10858	Rhomboid domain-containing protein. (362 aa)
	PTT_11758	RHOMBOID-like protein. (545 aa)
	PTT_15968	Rhomboid domain-containing protein. (592 aa)
	PTT_16175	Rhomboid domain-containing protein. (275 aa)

Your Current Organism:

Pyrenophora teres

NCBI taxonomy Id: 861557
Other names: P. teres f. teres 0-1, Pyrenophora teres f. teres 0-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTT_10858	PTT_11758	E3RQ86	E3RSA5	Rhomboid domain-containing protein.	RHOMBOID-like protein.	0.436
PTT_10858	PTT_17474	E3RQ86	E3S4J3	Rhomboid domain-containing protein.	Rhomboid domain-containing protein.	0.446
PTT_11758	PTT_10858	E3RSA5	E3RQ86	RHOMBOID-like protein.	Rhomboid domain-containing protein.	0.436
PTT_11758	PTT_15968	E3RSA5	E3S1A2	RHOMBOID-like protein.	Rhomboid domain-containing protein.	0.436
PTT_11758	PTT_17474	E3RSA5	E3S4J3	RHOMBOID-like protein.	Rhomboid domain-containing protein.	0.441
PTT_15968	PTT_11758	E3S1A2	E3RSA5	Rhomboid domain-containing protein.	RHOMBOID-like protein.	0.436
PTT_15968	PTT_17474	E3S1A2	E3S4J3	Rhomboid domain-containing protein.	Rhomboid domain-containing protein.	0.570
PTT_17474	PTT_10858	E3S4J3	E3RQ86	Rhomboid domain-containing protein.	Rhomboid domain-containing protein.	0.446
PTT_17474	PTT_11758	E3S4J3	E3RSA5	Rhomboid domain-containing protein.	RHOMBOID-like protein.	0.441
PTT_17474	PTT_15968	E3S4J3	E3S1A2	Rhomboid domain-containing protein.	Rhomboid domain-containing protein.	0.570