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fumB fumB ppdK ppdK maeB maeB ach ach mutB mutB mutA mutA mmdB mmdB mmdC mmdC EFM02147.1 EFM02147.1 porA porA EFM02115.1 EFM02115.1 EFM02062.1 EFM02062.1 nifJ nifJ pta pta ackA ackA frdB frdB sdhA sdhA fumB2 fumB2 ttdA ttdA porG porG EFM01325.1 EFM01325.1 vorB vorB oorD oorD pckA pckA mce mce mdh mdh
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fumBHydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (549 aa)
ppdKPyruvate, phosphate dikinase; COG: COG0574; Pfam: PF01326,PF00391,PF02896; InterPro: IPR010121; Belongs to the PEP-utilizing enzyme family. (907 aa)
maeBMalate dehydrogenase (oxaloacetate-decarboxylating); COG: COG0281; Pfam: PF00390,PF03949,PF01515; InterPro: IPR002505. (729 aa)
achSuccinate CoA transferase; COG: COG0427; Pfam: PF02550; InterPro: IPR003702. (502 aa)
mutBmethylmalonyl-CoA mutase; COG: COG1884; Pfam: PF01642,PF02310; InterPro: IPR006098. (714 aa)
mutAmethylmalonyl-CoA mutase, small subunit; COG: COG1884; Pfam: PF01642; InterPro: IPR004608. (618 aa)
mmdBSodium ion-translocating decarboxylase, beta subunit; COG: COG1883; Pfam: PF03977; InterPro: IPR005661. (385 aa)
mmdCBiotin-requiring enzyme; COG: COG0511; Pfam: PF00364; InterPro: IPR000089. (149 aa)
EFM02147.1Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; COG: COG1013; Pfam: PF02775; InterPro: IPR011766. (334 aa)
porA2-oxoacid:acceptor oxidoreductase, alpha subunit; COG: COG0674; Pfam: PF01558,PF01855; InterPro: IPR002880. (616 aa)
EFM02115.1LAO/AO transport system ATPase; COG: COG1703; Pfam: PF03308; InterPro: IPR005129. (369 aa)
EFM02062.1HMGL-like protein; COG: COG5016; Pfam: PF00682; InterPro: IPR013785. (590 aa)
nifJPyruvate synthase; COG: COG0674; Pfam: PF01855,PF01558,PF00037,PF02775; InterPro: IPR011895. (1190 aa)
ptaPhosphate acetyltransferase; COG: COG0280; Pfam: PF01515; InterPro: IPR002505. (357 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (399 aa)
frdBSuccinate dehydrogenase/fumarate reductase iron-sulfur subunit; InterPro: IPR012675. (253 aa)
sdhASuccinate dehydrogenase or fumarate reductase, flavoprotein subunit; COG: COG1053; Pfam: PF00890,PF02910; InterPro: IPR011280. (648 aa)
fumB2Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type; COG: COG1838; Pfam: PF05683; InterPro: IPR004647. (184 aa)
ttdAHydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type; COG: COG1951; Pfam: PF05681; InterPro: IPR004646. (280 aa)
porG2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit; COG: COG1014; Pfam: PF01558; InterPro: IPR002869. (188 aa)
EFM01325.1Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; COG: COG1013; Pfam: PF02775; InterPro: IPR011766. (256 aa)
vorBPyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein; COG: COG0674; Pfam: PF01855,PF02780; InterPro: IPR002880. (362 aa)
oorD4Fe-4S binding domain protein; Pfam: PF00037. (77 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (537 aa)
mcemethylmalonyl-CoA epimerase; COG: COG0346; Pfam: PF00903; InterPro: IPR004360. (134 aa)
mdhLactate/malate dehydrogenase, NAD binding domain protein; COG: COG0039; Pfam: PF00056,PF02866; InterPro: IPR015955; Belongs to the LDH/MDH superfamily. (330 aa)
Your Current Organism:
Prevotella marshii
NCBI taxonomy Id: 862515
Other names: P. marshii DSM 16973 = JCM 13450, Prevotella marshii DSM 16973, Prevotella marshii DSM 16973 = DSM 16973, Prevotella marshii DSM 16973 = JCM 13450, Prevotella marshii E9.34, Prevotella marshii JCM 13450
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