STRINGSTRING
EFM02271.1 EFM02271.1 ach ach mutB mutB EFM02029.1 EFM02029.1 pta pta ackA ackA acsA acsA lpdA lpdA mce mce mmdA mmdA mutA mutA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EFM02271.1Integrase core domain protein; COG: COG2826; Pfam: PF00665; InterPro: IPR001584. (265 aa)
achSuccinate CoA transferase; COG: COG0427; Pfam: PF02550; InterPro: IPR003702. (502 aa)
mutBmethylmalonyl-CoA mutase; COG: COG1884; Pfam: PF01642,PF02310; InterPro: IPR006098. (714 aa)
EFM02029.1Hypothetical protein. (359 aa)
ptaPhosphate acetyltransferase; COG: COG0280; Pfam: PF01515; InterPro: IPR002505. (357 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (399 aa)
acsAAMP-binding enzyme; COG: COG0365; Pfam: PF00501; InterPro: IPR000873. (552 aa)
lpdADihydrolipoyl dehydrogenase; COG: COG1249; Pfam: PF07992,PF00070,PF02852; InterPro: IPR006258. (449 aa)
mcemethylmalonyl-CoA epimerase; COG: COG0346; Pfam: PF00903; InterPro: IPR004360. (134 aa)
mmdACarboxyl transferase domain protein; COG: COG4799; Pfam: PF01039; InterPro: IPR000022. (517 aa)
mutAmethylmalonyl-CoA mutase, small subunit; COG: COG1884; Pfam: PF01642; InterPro: IPR004608. (618 aa)
Your Current Organism:
Prevotella marshii
NCBI taxonomy Id: 862515
Other names: P. marshii DSM 16973 = JCM 13450, Prevotella marshii DSM 16973, Prevotella marshii DSM 16973 = DSM 16973, Prevotella marshii DSM 16973 = JCM 13450, Prevotella marshii E9.34, Prevotella marshii JCM 13450
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