STRINGSTRING
XRCC6_1 XRCC6_1 LIG4_1 LIG4_1 CU097_011911 CU097_011911 CU097_006787 CU097_006787 KU80_2 KU80_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XRCC6_1X-ray repair cross-complementing protein 6. (400 aa)
LIG4_1DNA ligase (ATP). (414 aa)
CU097_011911PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (2126 aa)
CU097_006787Uncharacterized protein. (1686 aa)
KU80_2ATP-dependent DNA helicase II subunit 2. (746 aa)
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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