(96 nodes) GTP hydrolysis and joining of the 60S ribosomal subunit network (Rhizopus azygosporus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL20_1	60S ribosomal protein L20. (76 aa)
	RPS4_1	40S ribosomal protein S4. (179 aa)
	RPL39_1	60S ribosomal protein L39. (75 aa)
	RPL24_1	60S ribosomal protein L24. (125 aa)
	RPL11_1	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (146 aa)
	RPP0	Ribosomal protein P0 (A0) (L10E). (199 aa)
	RPL28_4	60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. (50 aa)
	CU097_002310	Uncharacterized protein. (160 aa)
	RPL28_1	60S ribosomal protein L28. (140 aa)
	RPL7A_1	60S ribosomal protein L7A. (265 aa)
	RPS14_1	Ribosomal protein S14, S11; Belongs to the universal ribosomal protein uS11 family. (149 aa)
	RPL36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (101 aa)
	RPL29_1	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (59 aa)
	RRN7	Pol I core factor CF. (351 aa)
	RPL28_2	60S ribosomal protein L28. (139 aa)
	RPS0_1	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (273 aa)
	RPL31_1	60S ribosomal protein L31. (122 aa)
	RPL8	60S ribosomal protein L8. (67 aa)
	CU097_000969	Ribos_L4_asso_C domain-containing protein. (238 aa)
	RPL29_2	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (59 aa)
	RPL4_1	60S ribosomal protein L4. (106 aa)
	RPL35_2	60S ribosomal protein L35. (125 aa)
	RPL11_2	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (375 aa)
	CU097_005147	Uncharacterized protein. (186 aa)
	RPS27_1	40S ribosomal protein S27. (84 aa)
	RPS6_2	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (241 aa)
	RPL35_1	60S ribosomal protein L35. (137 aa)
	RPL13_1	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (209 aa)
	RPL15_4	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (70 aa)
	RPL33A_1	60S ribosomal protein L33A. (106 aa)
	RPL7A_3	60S ribosomal protein L7A. (279 aa)
	RPL37A	Ribosomal protein L37; Binds to the 23S rRNA. (92 aa)
	CU097_001479	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
	RPL3_1	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (390 aa)
	RPS13_2	Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	RPL25_2	60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. (144 aa)
	CU097_010316	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (142 aa)
	RPL20_2	60S ribosomal protein L20. (203 aa)
	RPL5_2	60S ribosomal protein L5. (294 aa)
	RPL22	60S ribosomal protein L22. (122 aa)
	RPS29_1	40S ribosomal protein S29. (56 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (190 aa)
	RPL33A_2	60S ribosomal protein L33A. (114 aa)
	CU097_009106	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (99 aa)
	RPS25A	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (112 aa)
	RPL3_2	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (403 aa)
	RPL15_3	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	RPL17_2	60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (189 aa)
	CU097_013011	Ribos_L4_asso_C domain-containing protein. (180 aa)
	CU097_012663	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (214 aa)
	RPL34_1	60S ribosomal protein L34. (109 aa)
	RPL23_2	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	RPL5_1	60S ribosomal protein L5. (296 aa)
	RPS17	40S ribosomal protein S17. (103 aa)
	RPS20_1	40S ribosomal protein S20. (122 aa)
	RPL26_1	60S ribosomal protein L26. (61 aa)
	CU097_005911	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (234 aa)
	RPS11A	Ribosomal 40S subunit protein S11A. (126 aa)
	RPL11_3	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (793 aa)
	RPL2A_3	60S ribosomal protein L2A. (254 aa)
	RPL13_2	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (140 aa)
	RPL7A_2	60S ribosomal protein L7A. (272 aa)
	RPL25_3	60S ribosomal protein L25. (178 aa)
	CU097_005192	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (65 aa)
	RPS7_2	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (192 aa)
	RPL32_1	60S ribosomal protein L32. (131 aa)
	CU097_006540	Ribosomal_L18e/L15P domain-containing protein. (187 aa)
	CU097_012555	Ribosomal_L14e domain-containing protein. (172 aa)
	RPS15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (164 aa)
	RPL27A_1	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	RPS2_2	40S ribosomal protein. (137 aa)
	RPS26_2	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (110 aa)
	RPS18_2	Ribosomal 40S subunit protein S18B; Belongs to the universal ribosomal protein uS13 family. (154 aa)
	RPL12_1	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (170 aa)
	RPL38	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (69 aa)
	RPS3_3	40S ribosomal protein S3. (237 aa)
	RPS-16_3	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (140 aa)
	RPL39_2	60S ribosomal protein L39. (51 aa)
	RPS28A_2	40S ribosomal protein S28. (67 aa)
	RPS5_2	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	RPL23_1	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (133 aa)
	CU097_013688	Ribosomal_L14e domain-containing protein. (138 aa)
	CU097_014785	Ribosomal_L18e/L15P domain-containing protein. (181 aa)
	RPL24_2	60S ribosomal protein L24. (86 aa)
	RPL30_2	60S ribosomal protein L30. (108 aa)
	RPL-30	60S ribosomal protein L30. (51 aa)
	CU097_011527	Uncharacterized protein. (122 aa)
	RPL26_2	60S ribosomal protein L26. (129 aa)
	RPS23_1	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (157 aa)
	RPL12_3	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	RPL16B_3	60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family. (202 aa)
	UBI::CRP6	Ubiquitin-40S ribosomal protein S27a. (155 aa)
	RPS24_2	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (131 aa)
	CU097_002557	Uncharacterized protein. (160 aa)
	RPS22_2	40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	RPL31_2	60S ribosomal protein L31. (121 aa)

Your Current Organism:

Rhizopus azygosporus

NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CU097_000969	CU097_001479	A0A367IZG7	A0A367JC83	Ribos_L4_asso_C domain-containing protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.980
CU097_000969	CU097_002310	A0A367IZG7	A0A367IPP8	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein.	0.978
CU097_000969	CU097_002557	A0A367IZG7	A0A367KF39	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein.	0.978
CU097_000969	CU097_005147	A0A367IZG7	A0A367J3W2	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein.	0.958
CU097_000969	CU097_005192	A0A367IZG7	A0A367JY73	Ribos_L4_asso_C domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.993
CU097_000969	CU097_005911	A0A367IZG7	A0A367JUF9	Ribos_L4_asso_C domain-containing protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.959
CU097_000969	CU097_006540	A0A367IZG7	A0A367K0D7	Ribos_L4_asso_C domain-containing protein.	Ribosomal_L18e/L15P domain-containing protein.	0.982
CU097_000969	CU097_009106	A0A367IZG7	A0A367JHS5	Ribos_L4_asso_C domain-containing protein.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.954
CU097_000969	CU097_010316	A0A367IZG7	A0A367JDM2	Ribos_L4_asso_C domain-containing protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.957
CU097_000969	CU097_011527	A0A367IZG7	A0A367KD52	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein.	0.983
CU097_000969	CU097_012555	A0A367IZG7	A0A367K0D9	Ribos_L4_asso_C domain-containing protein.	Ribosomal_L14e domain-containing protein.	0.976
CU097_000969	CU097_012663	A0A367IZG7	A0A367JPE2	Ribos_L4_asso_C domain-containing protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.980
CU097_000969	CU097_013688	A0A367IZG7	A0A367K8K5	Ribos_L4_asso_C domain-containing protein.	Ribosomal_L14e domain-containing protein.	0.976
CU097_000969	CU097_014785	A0A367IZG7	A0A367K923	Ribos_L4_asso_C domain-containing protein.	Ribosomal_L18e/L15P domain-containing protein.	0.982
CU097_000969	RPL-30	A0A367IZG7	A0A367KAX6	Ribos_L4_asso_C domain-containing protein.	60S ribosomal protein L30.	0.985
CU097_000969	RPL11_1	A0A367IZG7	A0A367IMG0	Ribos_L4_asso_C domain-containing protein.	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.967
CU097_000969	RPL11_2	A0A367IZG7	A0A367J2M5	Ribos_L4_asso_C domain-containing protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.983
CU097_000969	RPL11_3	A0A367IZG7	A0A367JVC8	Ribos_L4_asso_C domain-containing protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.967
CU097_000969	RPL12_1	A0A367IZG7	A0A367K414	Ribos_L4_asso_C domain-containing protein.	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.941
CU097_000969	RPL12_3	A0A367IZG7	A0A367KE64	Ribos_L4_asso_C domain-containing protein.	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.941