18 items (Rhizopus azygosporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HSP70_4	Hsp70 chaperone; Belongs to the heat shock protein 70 family. (646 aa)
	SCJ1_1	DnaJ-protein scj1. (265 aa)
	CU097_007651	Uncharacterized protein; Belongs to the ClpA/ClpB family. (892 aa)
	SSZ1	Regulator protein; Belongs to the heat shock protein 70 family. (545 aa)
	CU097_005944	Uncharacterized protein. (497 aa)
	HSP60_2	Chaperonin; Belongs to the chaperonin (HSP60) family. (576 aa)
	CU097_000367	Uncharacterized protein. (106 aa)
	CU097_013027	ATPase_AAA_core domain-containing protein. (140 aa)
	HSP60_1	Chaperonin; Belongs to the chaperonin (HSP60) family. (577 aa)
	SCJ1_4	DnaJ-protein scj1. (383 aa)
	HSP70_5	Hsp70 chaperone; Belongs to the heat shock protein 70 family. (654 aa)
	HSP78_1	Chaperone ATPase hsp78. (566 aa)
	CU097_000232	Uncharacterized protein. (370 aa)
	HSP70_6	Hsp70 chaperone; Belongs to the heat shock protein 70 family. (654 aa)
	CU097_007672	Uncharacterized protein. (506 aa)
	CU097_004529	Uncharacterized protein. (497 aa)
	CU097_006489	Uncharacterized protein. (563 aa)
	CU097_005088	Uncharacterized protein; Belongs to the ClpA/ClpB family. (892 aa)

Your Current Organism:

Rhizopus azygosporus

NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CU097_000232	CU097_000367	A0A367KAG2	A0A367IM83	Uncharacterized protein.	Uncharacterized protein.	0.659
CU097_000232	CU097_005088	A0A367KAG2	A0A367J6I6	Uncharacterized protein.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.511
CU097_000232	CU097_007651	A0A367KAG2	A0A367JC70	Uncharacterized protein.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.511
CU097_000232	CU097_013027	A0A367KAG2	A0A367JNV5	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.511
CU097_000232	HSP60_1	A0A367KAG2	A0A367JPK3	Uncharacterized protein.	Chaperonin; Belongs to the chaperonin (HSP60) family.	0.419
CU097_000232	HSP60_2	A0A367KAG2	A0A367JJ11	Uncharacterized protein.	Chaperonin; Belongs to the chaperonin (HSP60) family.	0.419
CU097_000232	HSP70_4	A0A367KAG2	A0A367J824	Uncharacterized protein.	Hsp70 chaperone; Belongs to the heat shock protein 70 family.	0.751
CU097_000232	HSP70_5	A0A367KAG2	A0A367JT25	Uncharacterized protein.	Hsp70 chaperone; Belongs to the heat shock protein 70 family.	0.751
CU097_000232	HSP70_6	A0A367KAG2	A0A367KB12	Uncharacterized protein.	Hsp70 chaperone; Belongs to the heat shock protein 70 family.	0.751
CU097_000232	HSP78_1	A0A367KAG2	A0A367K0P8	Uncharacterized protein.	Chaperone ATPase hsp78.	0.511
CU097_000232	SCJ1_1	A0A367KAG2	A0A367JB28	Uncharacterized protein.	DnaJ-protein scj1.	0.778
CU097_000232	SCJ1_4	A0A367KAG2	A0A367JQ09	Uncharacterized protein.	DnaJ-protein scj1.	0.794
CU097_000232	SSZ1	A0A367KAG2	A0A367JE51	Uncharacterized protein.	Regulator protein; Belongs to the heat shock protein 70 family.	0.751
CU097_000367	CU097_000232	A0A367IM83	A0A367KAG2	Uncharacterized protein.	Uncharacterized protein.	0.659
CU097_000367	CU097_004529	A0A367IM83	A0A367J0Z8	Uncharacterized protein.	Uncharacterized protein.	0.494
CU097_000367	CU097_005088	A0A367IM83	A0A367J6I6	Uncharacterized protein.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.532
CU097_000367	CU097_005944	A0A367IM83	A0A367JG55	Uncharacterized protein.	Uncharacterized protein.	0.494
CU097_000367	CU097_007651	A0A367IM83	A0A367JC70	Uncharacterized protein.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.532
CU097_000367	CU097_007672	A0A367IM83	A0A367JJJ1	Uncharacterized protein.	Uncharacterized protein.	0.659
CU097_000367	CU097_013027	A0A367IM83	A0A367JNV5	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.532