(36 nodes) Regulation of protein catabolic process network (Rhizopus azygosporus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CU097_010958	Uncharacterized protein. (312 aa)
	CU097_011984	RBR-type E3 ubiquitin transferase. (738 aa)
	CU097_005455	RBR-type E3 ubiquitin transferase. (512 aa)
	CU097_009293	TMF_TATA_bd domain-containing protein. (814 aa)
	USP14	Ubiquitin carboxyl-terminal hydrolase. (481 aa)
	RPT2_2	ATPase of 26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family. (438 aa)
	RPN2	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (940 aa)
	CU097_010305	Ubiquitin-like domain-containing protein. (364 aa)
	CU097_009141	Uncharacterized protein. (167 aa)
	CDC20_1	Ubiquitin-protein transferase activating protein. (568 aa)
	CU097_008671	ANK_REP_REGION domain-containing protein. (716 aa)
	PTRH2	Peptidyl-tRNA hydrolase protein 2, mitochondrial. (98 aa)
	RPT1	26S proteasome regulatory subunit 7. (147 aa)
	PSMC5	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (392 aa)
	CU097_006345	PITH domain-containing protein. (206 aa)
	CU097_006287	PITH domain-containing protein. (206 aa)
	RPN3	26S proteasome non-ATPase regulatory subunit. (491 aa)
	RPN1	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (879 aa)
	CU097_007289	Fe2OG dioxygenase domain-containing protein. (539 aa)
	CU097_008757	RPN2_C domain-containing protein. (77 aa)
	CU097_001454	Uncharacterized protein. (159 aa)
	RPT4	26S proteasome subunit rpt4; Belongs to the AAA ATPase family. (299 aa)
	TBP-1	TATA-box-binding protein 1; Belongs to the AAA ATPase family. (431 aa)
	RPT3	26S proteasome regulatory subunit 6B; Belongs to the AAA ATPase family. (412 aa)
	CU097_010065	Fe2OG dioxygenase domain-containing protein. (534 aa)
	CU097_011436	Fe2OG dioxygenase domain-containing protein. (532 aa)
	CU097_011489	Uncharacterized protein. (313 aa)
	CDC20_2	Ubiquitin-protein transferase activating protein. (568 aa)
	PSMC2	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (168 aa)
	CU097_014374	ANK_REP_REGION domain-containing protein. (716 aa)
	CU097_010260	Fe2OG dioxygenase domain-containing protein. (539 aa)
	NUDT15	Nudix hydrolase 15, mitochondrial. (149 aa)
	CU097_012477	Peptidase_S15 domain-containing protein. (225 aa)
	RPT2_1	ATPase of 26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family. (438 aa)
	CU097_012214	Nefa_Nip30_N domain-containing protein. (212 aa)
	CU097_012415	Uncharacterized protein. (306 aa)

Your Current Organism:

Rhizopus azygosporus

NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC20_1	CU097_012415	A0A367JJ98	A0A367JV35	Ubiquitin-protein transferase activating protein.	Uncharacterized protein.	0.676
CDC20_1	PSMC2	A0A367JJ98	A0A367K1J7	Ubiquitin-protein transferase activating protein.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.684
CDC20_1	PSMC5	A0A367JJ98	A0A367JEW2	Ubiquitin-protein transferase activating protein.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.742
CDC20_1	RPT1	A0A367JJ98	A0A367JGR2	Ubiquitin-protein transferase activating protein.	26S proteasome regulatory subunit 7.	0.684
CDC20_1	RPT2_1	A0A367JJ98	A0A367KDS9	Ubiquitin-protein transferase activating protein.	ATPase of 26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	0.685
CDC20_1	RPT2_2	A0A367JJ98	A0A367JN94	Ubiquitin-protein transferase activating protein.	ATPase of 26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	0.685
CDC20_1	RPT3	A0A367JJ98	A0A367ITH0	Ubiquitin-protein transferase activating protein.	26S proteasome regulatory subunit 6B; Belongs to the AAA ATPase family.	0.709
CDC20_1	RPT4	A0A367JJ98	A0A367IYE4	Ubiquitin-protein transferase activating protein.	26S proteasome subunit rpt4; Belongs to the AAA ATPase family.	0.719
CDC20_1	TBP-1	A0A367JJ98	A0A367IUP8	Ubiquitin-protein transferase activating protein.	TATA-box-binding protein 1; Belongs to the AAA ATPase family.	0.720
CDC20_2	CU097_012415	A0A367JZZ3	A0A367JV35	Ubiquitin-protein transferase activating protein.	Uncharacterized protein.	0.676
CDC20_2	PSMC2	A0A367JZZ3	A0A367K1J7	Ubiquitin-protein transferase activating protein.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.684
CDC20_2	PSMC5	A0A367JZZ3	A0A367JEW2	Ubiquitin-protein transferase activating protein.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.742
CDC20_2	RPT1	A0A367JZZ3	A0A367JGR2	Ubiquitin-protein transferase activating protein.	26S proteasome regulatory subunit 7.	0.684
CDC20_2	RPT2_1	A0A367JZZ3	A0A367KDS9	Ubiquitin-protein transferase activating protein.	ATPase of 26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	0.685
CDC20_2	RPT2_2	A0A367JZZ3	A0A367JN94	Ubiquitin-protein transferase activating protein.	ATPase of 26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	0.685
CDC20_2	RPT3	A0A367JZZ3	A0A367ITH0	Ubiquitin-protein transferase activating protein.	26S proteasome regulatory subunit 6B; Belongs to the AAA ATPase family.	0.709
CDC20_2	RPT4	A0A367JZZ3	A0A367IYE4	Ubiquitin-protein transferase activating protein.	26S proteasome subunit rpt4; Belongs to the AAA ATPase family.	0.719
CDC20_2	TBP-1	A0A367JZZ3	A0A367IUP8	Ubiquitin-protein transferase activating protein.	TATA-box-binding protein 1; Belongs to the AAA ATPase family.	0.720
CU097_008757	CU097_012415	A0A367J4Q7	A0A367JV35	RPN2_C domain-containing protein.	Uncharacterized protein.	0.772
CU097_008757	PSMC2	A0A367J4Q7	A0A367K1J7	RPN2_C domain-containing protein.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.989