STRINGSTRING
LIG4_2 LIG4_2 LIG4_1 LIG4_1 CU097_006721 CU097_006721 CU097_011212 CU097_011212 CU097_009222 CU097_009222
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIG4_2DNA ligase (ATP); Belongs to the ATP-dependent DNA ligase family. (838 aa)
LIG4_1DNA ligase (ATP). (414 aa)
CU097_006721DNA_LIGASE_A3 domain-containing protein. (458 aa)
CU097_011212DNA ligase. (754 aa)
CU097_009222Uncharacterized protein. (458 aa)
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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