STRINGSTRING
ADY28528.1 ADY28528.1 ADY28529.1 ADY28529.1 ADY28530.1 ADY28530.1 ADY28531.1 ADY28531.1 ADY28532.1 ADY28532.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADY28528.1Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: rbi:RB2501_09205 putative peptidase; PFAM: Peptidase M23; SPTR: Putative peptidase; PFAM: Peptidase family M23. (325 aa)
ADY28529.1Regulatory protein MerR; InterPro IPR000551; KEGG: fbc:FB2170_08829 putative transcriptional regulator protein; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Putative transcriptional regulator protein; PFAM: MerR family regulatory protein. (109 aa)
ADY28530.1LemA family protein; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: fbc:FB2170_08824 LemA protein; PFAM: LemA; SPTR: LemA protein; PFAM: LemA family. (199 aa)
ADY28531.1Protein of unknown function DUF477; COGs: COG3762 membrane protein; InterPro IPR007621; KEGG: fbc:FB2170_08819 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF477). (145 aa)
ADY28532.1Protein of unknown function DUF477; COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: fbc:FB2170_08814 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF477). (266 aa)
Your Current Organism:
Cellulophaga lytica
NCBI taxonomy Id: 867900
Other names: C. lytica DSM 7489, Cellulophaga lytica ATCC 23178, Cellulophaga lytica DSM 7489, Cellulophaga lytica IAM 14306, Cellulophaga lytica str. DSM 7489, Cellulophaga lytica strain DSM 7489
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