(13 nodes) U2 snRNP, and Leucine-rich repeats, outliers network (Theileria orientalis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TOT_020000369	Splicing factor 3b subunit 4. (326 aa)
	TOT_020001062	Splicing factor subunit; Belongs to the SF3B5 family. (91 aa)
	TOT_030000327	Chromosome condensation protein. (2619 aa)
	TOT_030000419	Spliceosome-associated protein. (550 aa)
	TOT_030000784	Fumarate hydratase class I. (1050 aa)
	TOT_020001041	RNA helicase; Belongs to the DEAD box helicase family. (609 aa)
	TOT_010000389	Leucine-rich repeat, typical subtype containing protein. (217 aa)
	TOT_020001028	Uncharacterized protein. (113 aa)
	TOT_020001073	Splicing factor 3a subunit 2. (144 aa)
	TOT_020000383	Splicing factor 3 subunit 1. (491 aa)
	TOT_030000637	Splicing factor subunit. (1141 aa)
	TOT_020000524	Pre-mRNA branch site protein p14. (181 aa)
	TOT_040000717	Splicing factor 3b subunit. (1272 aa)

Your Current Organism:

Theileria orientalis

NCBI taxonomy Id: 869250
Other names: T. orientalis strain Shintoku, Theileria orientalis strain Shintoku

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TOT_010000389	TOT_020000369	J4CC79	J4C3A6	Leucine-rich repeat, typical subtype containing protein.	Splicing factor 3b subunit 4.	0.993
TOT_010000389	TOT_020000383	J4CC79	J4D7D6	Leucine-rich repeat, typical subtype containing protein.	Splicing factor 3 subunit 1.	0.995
TOT_010000389	TOT_020000524	J4CC79	J4DP84	Leucine-rich repeat, typical subtype containing protein.	Pre-mRNA branch site protein p14.	0.862
TOT_010000389	TOT_020001028	J4CC79	J4CCS3	Leucine-rich repeat, typical subtype containing protein.	Uncharacterized protein.	0.998
TOT_010000389	TOT_020001041	J4CC79	J4C815	Leucine-rich repeat, typical subtype containing protein.	RNA helicase; Belongs to the DEAD box helicase family.	0.676
TOT_010000389	TOT_020001062	J4CC79	J4C3C6	Leucine-rich repeat, typical subtype containing protein.	Splicing factor subunit; Belongs to the SF3B5 family.	0.982
TOT_010000389	TOT_020001073	J4CC79	J4CD17	Leucine-rich repeat, typical subtype containing protein.	Splicing factor 3a subunit 2.	0.928
TOT_010000389	TOT_030000327	J4CC79	J4C3U8	Leucine-rich repeat, typical subtype containing protein.	Chromosome condensation protein.	0.998
TOT_010000389	TOT_030000419	J4CC79	J4C3W7	Leucine-rich repeat, typical subtype containing protein.	Spliceosome-associated protein.	0.994
TOT_010000389	TOT_030000637	J4CC79	J4D9G8	Leucine-rich repeat, typical subtype containing protein.	Splicing factor subunit.	0.995
TOT_010000389	TOT_030000784	J4CC79	J4C440	Leucine-rich repeat, typical subtype containing protein.	Fumarate hydratase class I.	0.995
TOT_010000389	TOT_040000717	J4CC79	J7M4N7	Leucine-rich repeat, typical subtype containing protein.	Splicing factor 3b subunit.	0.995
TOT_020000369	TOT_010000389	J4C3A6	J4CC79	Splicing factor 3b subunit 4.	Leucine-rich repeat, typical subtype containing protein.	0.993
TOT_020000369	TOT_020000383	J4C3A6	J4D7D6	Splicing factor 3b subunit 4.	Splicing factor 3 subunit 1.	0.995
TOT_020000369	TOT_020000524	J4C3A6	J4DP84	Splicing factor 3b subunit 4.	Pre-mRNA branch site protein p14.	0.999
TOT_020000369	TOT_020001028	J4C3A6	J4CCS3	Splicing factor 3b subunit 4.	Uncharacterized protein.	0.999
TOT_020000369	TOT_020001041	J4C3A6	J4C815	Splicing factor 3b subunit 4.	RNA helicase; Belongs to the DEAD box helicase family.	0.999
TOT_020000369	TOT_020001062	J4C3A6	J4C3C6	Splicing factor 3b subunit 4.	Splicing factor subunit; Belongs to the SF3B5 family.	0.999
TOT_020000369	TOT_020001073	J4C3A6	J4CD17	Splicing factor 3b subunit 4.	Splicing factor 3a subunit 2.	0.954
TOT_020000369	TOT_030000327	J4C3A6	J4C3U8	Splicing factor 3b subunit 4.	Chromosome condensation protein.	0.972