(34 nodes) mRNA Splicing - Major Pathway network (Theileria orientalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TOT_010000538	Uncharacterized protein. (742 aa)
	TOT_010000587	DEAD-box family helicase. (980 aa)
	TOT_010000770	Cyclophilin peptidyl-prolyl cis-trans isomerase protein. (633 aa)
	TOT_010001130	Uncharacterized protein. (387 aa)
	TOT_020000359	Splicing factor. (219 aa)
	TOT_020000570	Peptidyl-prolyl cis-trans isomerase. (503 aa)
	TOT_020000866	C3H1-type domain-containing protein. (240 aa)
	TOT_030000519	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (357 aa)
	TOT_030000623	PPIase cyclophilin-type domain-containing protein. (528 aa)
	TOT_040000551	WD_REPEATS_REGION domain-containing protein. (564 aa)
	TOT_010000478	Cwf21 domain-containing protein. (293 aa)
	TOT_020000199	Maternal g10 transcript. (150 aa)
	TOT_020000983	Uncharacterized protein. (231 aa)
	TOT_010000309	RRM domain-containing protein. (118 aa)
	TOT_020000464	RNA processing protein. (673 aa)
	TOT_020000498	Chromatin-binding protein. (604 aa)
	TOT_020000586	Peptidyl-prolyl cis-trans isomerase. (441 aa)
	TOT_020000772	FHA domain-containing protein. (212 aa)
	TOT_020000777	Uncharacterized protein. (192 aa)
	TOT_030000634	Uncharacterized protein. (500 aa)
	TOT_010000503	ATP-dependent helicase. (1167 aa)
	TOT_020000403	WD_REPEATS_REGION domain-containing protein. (685 aa)
	TOT_030000706	Uncharacterized protein. (1743 aa)
	TOT_030000777	Uncharacterized protein. (365 aa)
	TOT_010000768	Complexed with cef1p. (353 aa)
	TOT_010001029	Step II splicing factor. (213 aa)
	TOT_010001364	Cell-cycle-control protein. (541 aa)
	TOT_020000271	ATP-dependent helicase. (672 aa)
	TOT_030000457	DEAD-box family helicase. (1155 aa)
	TOT_030000502	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (187 aa)
	TOT_010000081	RNA-processing protein. (829 aa)
	TOT_010000095	HA2 domain-containing protein. (680 aa)
	TOT_010000221	RNA-binding motif protein, X-linked 2. (291 aa)
	TOT_010000015	PA14 domain-containing protein. (852 aa)

Your Current Organism:

Theileria orientalis

NCBI taxonomy Id: 869250
Other names: T. orientalis strain Shintoku, Theileria orientalis strain Shintoku

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TOT_010000015	TOT_010000095	J7MGJ7	J7MBV3	PA14 domain-containing protein.	HA2 domain-containing protein.	0.622
TOT_010000015	TOT_010000309	J7MGJ7	J4CC63	PA14 domain-containing protein.	RRM domain-containing protein.	0.692
TOT_010000015	TOT_010000478	J7MGJ7	J4C7G8	PA14 domain-containing protein.	Cwf21 domain-containing protein.	0.489
TOT_010000015	TOT_010000503	J7MGJ7	J4D5L5	PA14 domain-containing protein.	ATP-dependent helicase.	0.622
TOT_010000015	TOT_010000538	J7MGJ7	J4C2Q0	PA14 domain-containing protein.	Uncharacterized protein.	0.489
TOT_010000015	TOT_010000587	J7MGJ7	J4C2R0	PA14 domain-containing protein.	DEAD-box family helicase.	0.584
TOT_010000015	TOT_010000768	J7MGJ7	J4DNP3	PA14 domain-containing protein.	Complexed with cef1p.	0.633
TOT_010000015	TOT_010000770	J7MGJ7	J4C2U7	PA14 domain-containing protein.	Cyclophilin peptidyl-prolyl cis-trans isomerase protein.	0.644
TOT_010000015	TOT_020000199	J7MGJ7	J4C801	PA14 domain-containing protein.	Maternal g10 transcript.	0.671
TOT_010000015	TOT_020000271	J7MGJ7	J4DP32	PA14 domain-containing protein.	ATP-dependent helicase.	0.584
TOT_010000015	TOT_020000359	J7MGJ7	J4C3A4	PA14 domain-containing protein.	Splicing factor.	0.713
TOT_010000015	TOT_020000403	J7MGJ7	J4D7E8	PA14 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.932
TOT_010000015	TOT_020000464	J7MGJ7	J4CCY5	PA14 domain-containing protein.	RNA processing protein.	0.813
TOT_010000015	TOT_020000570	J7MGJ7	J4C3E7	PA14 domain-containing protein.	Peptidyl-prolyl cis-trans isomerase.	0.717
TOT_010000015	TOT_020000586	J7MGJ7	J4CD10	PA14 domain-containing protein.	Peptidyl-prolyl cis-trans isomerase.	0.710
TOT_010000015	TOT_020000777	J7MGJ7	J4CD49	PA14 domain-containing protein.	Uncharacterized protein.	0.456
TOT_010000015	TOT_030000457	J7MGJ7	J4DPS1	PA14 domain-containing protein.	DEAD-box family helicase.	0.691
TOT_010000015	TOT_030000502	J7MGJ7	J4DPT0	PA14 domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.773
TOT_010000015	TOT_030000519	J7MGJ7	J4C3Y7	PA14 domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.717
TOT_010000015	TOT_030000623	J7MGJ7	J4C408	PA14 domain-containing protein.	PPIase cyclophilin-type domain-containing protein.	0.760