12 items (Theileria orientalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TOT_020000613	Uncharacterized protein. (1924 aa)
	TOT_010000913	60S ribosomal protein L35. (123 aa)
	TOT_040000670	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (463 aa)
	TOT_040000100	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (813 aa)
	TOT_040000450	CLP1_P domain-containing protein. (674 aa)
	TOT_030000935	Box C/D snoRNA protein. (183 aa)
	TOT_030000230	BOP1NT domain-containing protein. (807 aa)
	TOT_030000742	Uncharacterized protein. (129 aa)
	TOT_010000977	Nucleolar phosphoprotein. (194 aa)
	TOT_030000123	60S ribosomal protein L7. (258 aa)
	TOT_030000599	Uncharacterized protein. (409 aa)
	TOT_040000119	Microtubule-associated protein. (434 aa)

Your Current Organism:

Theileria orientalis

NCBI taxonomy Id: 869250
Other names: T. orientalis strain Shintoku, Theileria orientalis strain Shintoku

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TOT_010000913	TOT_010000977	J4C7Q7	J4CCJ9	60S ribosomal protein L35.	Nucleolar phosphoprotein.	0.899
TOT_010000913	TOT_030000123	J4C7Q7	J4CDB7	60S ribosomal protein L35.	60S ribosomal protein L7.	0.999
TOT_010000913	TOT_030000230	J4C7Q7	J4DPM6	60S ribosomal protein L35.	BOP1NT domain-containing protein.	0.916
TOT_010000913	TOT_040000100	J4C7Q7	J4DQ26	60S ribosomal protein L35.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.851
TOT_010000913	TOT_040000119	J4C7Q7	J4CDU2	60S ribosomal protein L35.	Microtubule-associated protein.	0.922
TOT_010000913	TOT_040000670	J4C7Q7	J4C4J6	60S ribosomal protein L35.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.903
TOT_010000977	TOT_010000913	J4CCJ9	J4C7Q7	Nucleolar phosphoprotein.	60S ribosomal protein L35.	0.899
TOT_010000977	TOT_020000613	J4CCJ9	J4D7U0	Nucleolar phosphoprotein.	Uncharacterized protein.	0.448
TOT_010000977	TOT_030000123	J4CCJ9	J4CDB7	Nucleolar phosphoprotein.	60S ribosomal protein L7.	0.990
TOT_010000977	TOT_030000230	J4CCJ9	J4DPM6	Nucleolar phosphoprotein.	BOP1NT domain-containing protein.	0.988
TOT_010000977	TOT_040000100	J4CCJ9	J4DQ26	Nucleolar phosphoprotein.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.994
TOT_010000977	TOT_040000119	J4CCJ9	J4CDU2	Nucleolar phosphoprotein.	Microtubule-associated protein.	0.995
TOT_010000977	TOT_040000670	J4CCJ9	J4C4J6	Nucleolar phosphoprotein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.994
TOT_020000613	TOT_010000977	J4D7U0	J4CCJ9	Uncharacterized protein.	Nucleolar phosphoprotein.	0.448
TOT_020000613	TOT_030000230	J4D7U0	J4DPM6	Uncharacterized protein.	BOP1NT domain-containing protein.	0.702
TOT_020000613	TOT_040000100	J4D7U0	J4DQ26	Uncharacterized protein.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.526
TOT_020000613	TOT_040000119	J4D7U0	J4CDU2	Uncharacterized protein.	Microtubule-associated protein.	0.508
TOT_020000613	TOT_040000450	J4D7U0	J4DQ97	Uncharacterized protein.	CLP1_P domain-containing protein.	0.521
TOT_020000613	TOT_040000670	J4D7U0	J4C4J6	Uncharacterized protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.458
TOT_030000123	TOT_010000913	J4CDB7	J4C7Q7	60S ribosomal protein L7.	60S ribosomal protein L35.	0.999