12 items (Theileria orientalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TOT_040000792	Adaptin_N domain-containing protein. (932 aa)
	TOT_040000688	AP-1 complex subunit gamma; Belongs to the adaptor complexes large subunit family. (1052 aa)
	TOT_010000615	Adaptor protein; Belongs to the adaptor complexes medium subunit family. (507 aa)
	TOT_010000517	ENTH domain-containing protein. (698 aa)
	TOT_010001264	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (937 aa)
	TOT_030000141	Uncharacterized protein. (533 aa)
	TOT_040000332	Uncharacterized protein. (730 aa)
	TOT_030000943	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (923 aa)
	TOT_030000371	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1817 aa)
	TOT_010001057	Uncharacterized protein. (1169 aa)
	TOT_010000345	Uncharacterized protein. (332 aa)
	TOT_020000408	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)

Your Current Organism:

Theileria orientalis

NCBI taxonomy Id: 869250
Other names: T. orientalis strain Shintoku, Theileria orientalis strain Shintoku

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TOT_010000345	TOT_010000517	J4C7E1	J4DNJ2	Uncharacterized protein.	ENTH domain-containing protein.	0.544
TOT_010000345	TOT_010000615	J4C7E1	J4DNL2	Uncharacterized protein.	Adaptor protein; Belongs to the adaptor complexes medium subunit family.	0.437
TOT_010000345	TOT_030000371	J4C7E1	J4C8N7	Uncharacterized protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.990
TOT_010000345	TOT_030000943	J4C7E1	J4C8V4	Uncharacterized protein.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.735
TOT_010000345	TOT_040000688	J4C7E1	J7M4N0	Uncharacterized protein.	AP-1 complex subunit gamma; Belongs to the adaptor complexes large subunit family.	0.643
TOT_010000345	TOT_040000792	J4C7E1	J7M4R0	Uncharacterized protein.	Adaptin_N domain-containing protein.	0.643
TOT_010000517	TOT_010000345	J4DNJ2	J4C7E1	ENTH domain-containing protein.	Uncharacterized protein.	0.544
TOT_010000517	TOT_010000615	J4DNJ2	J4DNL2	ENTH domain-containing protein.	Adaptor protein; Belongs to the adaptor complexes medium subunit family.	0.823
TOT_010000517	TOT_020000408	J4DNJ2	J4C3B4	ENTH domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.764
TOT_010000517	TOT_030000371	J4DNJ2	J4C8N7	ENTH domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.981
TOT_010000517	TOT_030000943	J4DNJ2	J4C8V4	ENTH domain-containing protein.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.924
TOT_010000517	TOT_040000688	J4DNJ2	J7M4N0	ENTH domain-containing protein.	AP-1 complex subunit gamma; Belongs to the adaptor complexes large subunit family.	0.816
TOT_010000517	TOT_040000792	J4DNJ2	J7M4R0	ENTH domain-containing protein.	Adaptin_N domain-containing protein.	0.816
TOT_010000615	TOT_010000345	J4DNL2	J4C7E1	Adaptor protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.437
TOT_010000615	TOT_010000517	J4DNL2	J4DNJ2	Adaptor protein; Belongs to the adaptor complexes medium subunit family.	ENTH domain-containing protein.	0.823
TOT_010000615	TOT_020000408	J4DNL2	J4C3B4	Adaptor protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
TOT_010000615	TOT_030000371	J4DNL2	J4C8N7	Adaptor protein; Belongs to the adaptor complexes medium subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.958
TOT_010000615	TOT_030000943	J4DNL2	J4C8V4	Adaptor protein; Belongs to the adaptor complexes medium subunit family.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.999
TOT_010000615	TOT_040000688	J4DNL2	J7M4N0	Adaptor protein; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma; Belongs to the adaptor complexes large subunit family.	0.952
TOT_010000615	TOT_040000792	J4DNL2	J7M4R0	Adaptor protein; Belongs to the adaptor complexes medium subunit family.	Adaptin_N domain-containing protein.	0.928