28 items (Theileria orientalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TOT_010000750	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (836 aa)
	TOT_010001145	Small GTPase. (212 aa)
	TOT_020000408	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	TOT_040000350	Small GTPase. (272 aa)
	TOT_010000693	Uncharacterized protein. (329 aa)
	TOT_020001000	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	TOT_030000204	Ras-related GTPase. (215 aa)
	TOT_030000371	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1817 aa)
	TOT_030000943	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (923 aa)
	TOT_010000354	Uncharacterized protein. (190 aa)
	TOT_010000766	ADP-ribosylation factor GTPase activating protein. (363 aa)
	TOT_020000183	1-phosphatidylinositol-4-phosphate 5-kinase. (909 aa)
	TOT_040000063	Likely GTP/GDP exchange factor for ARF. (2125 aa)
	TOT_040000129	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (218 aa)
	TOT_010000586	Rab5 GTPase. (212 aa)
	TOT_010000910	Uncharacterized protein. (536 aa)
	TOT_020000137	Heat shock protein; Belongs to the heat shock protein 70 family. (648 aa)
	TOT_030000082	Uncharacterized protein. (217 aa)
	TOT_030000301	Uncharacterized protein. (250 aa)
	TOT_010000615	Adaptor protein; Belongs to the adaptor complexes medium subunit family. (507 aa)
	TOT_010001043	ADP-ribosylation factor GTPase activating protein. (593 aa)
	TOT_020000651	Uncharacterized protein. (220 aa)
	TOT_020000963	Uncharacterized protein. (565 aa)
	TOT_030000260	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (537 aa)
	TOT_040000146	Hbeta58/Vps26 protein. (297 aa)
	TOT_010000123	GTPase-activating protein. (300 aa)
	TOT_040000765	Uncharacterized protein. (357 aa)
	TOT_040000761	Endosome sorting protein. (169 aa)

Your Current Organism:

Theileria orientalis

NCBI taxonomy Id: 869250
Other names: T. orientalis strain Shintoku, Theileria orientalis strain Shintoku

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TOT_010000123	TOT_010000586	J7M4J7	J4D5R0	GTPase-activating protein.	Rab5 GTPase.	0.452
TOT_010000123	TOT_010000766	J7M4J7	J4CCF6	GTPase-activating protein.	ADP-ribosylation factor GTPase activating protein.	0.937
TOT_010000123	TOT_010001043	J7M4J7	J4DNU9	GTPase-activating protein.	ADP-ribosylation factor GTPase activating protein.	0.926
TOT_010000123	TOT_010001145	J7M4J7	J4C323	GTPase-activating protein.	Small GTPase.	0.753
TOT_010000123	TOT_020001000	J7M4J7	J4C807	GTPase-activating protein.	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	0.660
TOT_010000123	TOT_040000063	J7M4J7	J4CDT1	GTPase-activating protein.	Likely GTP/GDP exchange factor for ARF.	0.450
TOT_010000123	TOT_040000350	J7M4J7	J4C4D0	GTPase-activating protein.	Small GTPase.	0.452
TOT_010000354	TOT_010000693	J4CC72	J4C7L2	Uncharacterized protein.	Uncharacterized protein.	0.713
TOT_010000354	TOT_010000910	J4CC72	J4D6A6	Uncharacterized protein.	Uncharacterized protein.	0.714
TOT_010000354	TOT_020000651	J4CC72	J4DPB1	Uncharacterized protein.	Uncharacterized protein.	0.999
TOT_010000354	TOT_030000082	J4CC72	J4D8K5	Uncharacterized protein.	Uncharacterized protein.	0.827
TOT_010000354	TOT_040000761	J4CC72	J7MF30	Uncharacterized protein.	Endosome sorting protein.	0.968
TOT_010000586	TOT_010000123	J4D5R0	J7M4J7	Rab5 GTPase.	GTPase-activating protein.	0.452
TOT_010000586	TOT_010000693	J4D5R0	J4C7L2	Rab5 GTPase.	Uncharacterized protein.	0.433
TOT_010000586	TOT_010000750	J4D5R0	J4C2U3	Rab5 GTPase.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.531
TOT_010000586	TOT_010001145	J4D5R0	J4C323	Rab5 GTPase.	Small GTPase.	0.691
TOT_010000586	TOT_020000137	J4D5R0	J4D700	Rab5 GTPase.	Heat shock protein; Belongs to the heat shock protein 70 family.	0.506
TOT_010000586	TOT_020001000	J4D5R0	J4C807	Rab5 GTPase.	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	0.643
TOT_010000586	TOT_030000204	J4D5R0	J4C8K4	Rab5 GTPase.	Ras-related GTPase.	0.802
TOT_010000586	TOT_030000260	J4D5R0	J4DPN2	Rab5 GTPase.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.825