(7 nodes) Mixed, incl. Transcription export complex, and SAP domain superfamily network (Metschnikowia bicuspidata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1A0H4S0	Uncharacterized protein. (134 aa)
	A0A1A0H6W7	Uncharacterized protein. (177 aa)
	A0A1A0HAB5	DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (431 aa)
	A0A1A0HE84	ATP-dependent RNA helicase SUB2. (432 aa)
	A0A1A0HHF1	Uncharacterized protein. (1457 aa)
	A0A1A0HI46	SAP domain-containing protein. (177 aa)
	A0A1A0HJ09	WD40 repeat-like protein. (348 aa)

Your Current Organism:

Metschnikowia bicuspidata

NCBI taxonomy Id: 869754
Other names: M. bicuspidata var. bicuspidata NRRL YB-4993, Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1A0H4S0	A0A1A0HAB5	Uncharacterized protein.	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	0.967
A0A1A0H4S0	A0A1A0HE84	Uncharacterized protein.	ATP-dependent RNA helicase SUB2.	0.993
A0A1A0H4S0	A0A1A0HHF1	Uncharacterized protein.	Uncharacterized protein.	0.986
A0A1A0H4S0	A0A1A0HI46	Uncharacterized protein.	SAP domain-containing protein.	0.844
A0A1A0H4S0	A0A1A0HJ09	Uncharacterized protein.	WD40 repeat-like protein.	0.916
A0A1A0H6W7	A0A1A0HAB5	Uncharacterized protein.	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	0.967
A0A1A0H6W7	A0A1A0HE84	Uncharacterized protein.	ATP-dependent RNA helicase SUB2.	0.984
A0A1A0H6W7	A0A1A0HHF1	Uncharacterized protein.	Uncharacterized protein.	0.979
A0A1A0H6W7	A0A1A0HI46	Uncharacterized protein.	SAP domain-containing protein.	0.844
A0A1A0H6W7	A0A1A0HJ09	Uncharacterized protein.	WD40 repeat-like protein.	0.916
A0A1A0HAB5	A0A1A0H4S0	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.967
A0A1A0HAB5	A0A1A0H6W7	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.967
A0A1A0HAB5	A0A1A0HE84	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	ATP-dependent RNA helicase SUB2.	0.970
A0A1A0HAB5	A0A1A0HHF1	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.754
A0A1A0HAB5	A0A1A0HI46	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	SAP domain-containing protein.	0.787
A0A1A0HAB5	A0A1A0HJ09	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	WD40 repeat-like protein.	0.708
A0A1A0HE84	A0A1A0H4S0	ATP-dependent RNA helicase SUB2.	Uncharacterized protein.	0.993
A0A1A0HE84	A0A1A0H6W7	ATP-dependent RNA helicase SUB2.	Uncharacterized protein.	0.984
A0A1A0HE84	A0A1A0HAB5	ATP-dependent RNA helicase SUB2.	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	0.970
A0A1A0HE84	A0A1A0HHF1	ATP-dependent RNA helicase SUB2.	Uncharacterized protein.	0.995