(12 nodes) Vesicle fusion network (Metschnikowia bicuspidata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1A0H9C3	t-SNARE; Belongs to the syntaxin family. (314 aa)
	A0A1A0H9P8	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family. (623 aa)
	A0A1A0H9Z0	Snare-like protein; Belongs to the synaptobrevin family. (199 aa)
	A0A1A0HA14	t-SNARE; Belongs to the syntaxin family. (290 aa)
	A0A1A0HAC4	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (224 aa)
	A0A1A0HBS2	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex. (225 aa)
	A0A1A0HCC7	AAA-domain-containing protein. (783 aa)
	A0A1A0HEE3	Uncharacterized protein. (330 aa)
	A0A1A0HH92	Uncharacterized protein. (97 aa)
	A0A1A0HI35	t-SNARE coiled-coil homology domain-containing protein. (147 aa)
	A0A1A0HJV3	Snare-like protein; Belongs to the synaptobrevin family. (215 aa)
	A0A1A0HKR7	TPR-like protein. (292 aa)

Your Current Organism:

Metschnikowia bicuspidata

NCBI taxonomy Id: 869754
Other names: M. bicuspidata var. bicuspidata NRRL YB-4993, Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1A0H9C3	A0A1A0H9P8	t-SNARE; Belongs to the syntaxin family.	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	0.997
A0A1A0H9C3	A0A1A0H9Z0	t-SNARE; Belongs to the syntaxin family.	Snare-like protein; Belongs to the synaptobrevin family.	0.999
A0A1A0H9C3	A0A1A0HA14	t-SNARE; Belongs to the syntaxin family.	t-SNARE; Belongs to the syntaxin family.	0.818
A0A1A0H9C3	A0A1A0HAC4	t-SNARE; Belongs to the syntaxin family.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.999
A0A1A0H9C3	A0A1A0HBS2	t-SNARE; Belongs to the syntaxin family.	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	0.999
A0A1A0H9C3	A0A1A0HCC7	t-SNARE; Belongs to the syntaxin family.	AAA-domain-containing protein.	0.898
A0A1A0H9C3	A0A1A0HEE3	t-SNARE; Belongs to the syntaxin family.	Uncharacterized protein.	0.804
A0A1A0H9C3	A0A1A0HH92	t-SNARE; Belongs to the syntaxin family.	Uncharacterized protein.	0.990
A0A1A0H9C3	A0A1A0HI35	t-SNARE; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.999
A0A1A0H9C3	A0A1A0HJV3	t-SNARE; Belongs to the syntaxin family.	Snare-like protein; Belongs to the synaptobrevin family.	0.998
A0A1A0H9C3	A0A1A0HKR7	t-SNARE; Belongs to the syntaxin family.	TPR-like protein.	0.977
A0A1A0H9P8	A0A1A0H9C3	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	t-SNARE; Belongs to the syntaxin family.	0.997
A0A1A0H9P8	A0A1A0H9Z0	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	Snare-like protein; Belongs to the synaptobrevin family.	0.997
A0A1A0H9P8	A0A1A0HA14	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	t-SNARE; Belongs to the syntaxin family.	0.759
A0A1A0H9P8	A0A1A0HAC4	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.981
A0A1A0H9P8	A0A1A0HBS2	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	0.999
A0A1A0H9P8	A0A1A0HCC7	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	AAA-domain-containing protein.	0.990
A0A1A0H9P8	A0A1A0HEE3	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.574
A0A1A0H9P8	A0A1A0HH92	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.976
A0A1A0H9P8	A0A1A0HI35	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	t-SNARE coiled-coil homology domain-containing protein.	0.999