16 items (Metschnikowia bicuspidata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1A0H211	Uncharacterized protein. (344 aa)
	A0A1A0H6Y0	HDAC_interact domain-containing protein. (1443 aa)
	A0A1A0H945	Histone deacetylase transcription modifier. (521 aa)
	A0A1A0HA32	Chromatin modification-related protein. (335 aa)
	A0A1A0HBW7	WD40 repeat-like protein. (437 aa)
	A0A1A0HC89	FAS1 domain-containing protein. (230 aa)
	A0A1A0HCZ6	Uncharacterized protein. (720 aa)
	A0A1A0HDQ8	Hist_deacetyl domain-containing protein. (712 aa)
	A0A1A0HF36	Arginase/deacetylase. (372 aa)
	A0A1A0HF56	Rxt3-domain-containing protein. (277 aa)
	A0A1A0HFF3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (448 aa)
	A0A1A0HG64	PHD domain-containing protein. (355 aa)
	A0A1A0HGF8	RXT2_N domain-containing protein. (334 aa)
	A0A1A0HGS7	WD40 repeat-like protein. (494 aa)
	A0A1A0HJB1	Uncharacterized protein. (681 aa)
	A0A1A0HK53	Thioredoxin-like_fold domain-containing protein. (218 aa)

Your Current Organism:

Metschnikowia bicuspidata

NCBI taxonomy Id: 869754
Other names: M. bicuspidata var. bicuspidata NRRL YB-4993, Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1A0H211	A0A1A0H6Y0	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.937
A0A1A0H211	A0A1A0H945	Uncharacterized protein.	Histone deacetylase transcription modifier.	0.963
A0A1A0H211	A0A1A0HA32	Uncharacterized protein.	Chromatin modification-related protein.	0.925
A0A1A0H211	A0A1A0HBW7	Uncharacterized protein.	WD40 repeat-like protein.	0.817
A0A1A0H211	A0A1A0HC89	Uncharacterized protein.	FAS1 domain-containing protein.	0.937
A0A1A0H211	A0A1A0HCZ6	Uncharacterized protein.	Uncharacterized protein.	0.789
A0A1A0H211	A0A1A0HDQ8	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.809
A0A1A0H211	A0A1A0HF36	Uncharacterized protein.	Arginase/deacetylase.	0.893
A0A1A0H211	A0A1A0HF56	Uncharacterized protein.	Rxt3-domain-containing protein.	0.707
A0A1A0H211	A0A1A0HFF3	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.893
A0A1A0H211	A0A1A0HG64	Uncharacterized protein.	PHD domain-containing protein.	0.783
A0A1A0H211	A0A1A0HGF8	Uncharacterized protein.	RXT2_N domain-containing protein.	0.757
A0A1A0H211	A0A1A0HGS7	Uncharacterized protein.	WD40 repeat-like protein.	0.849
A0A1A0H211	A0A1A0HJB1	Uncharacterized protein.	Uncharacterized protein.	0.620
A0A1A0H211	A0A1A0HK53	Uncharacterized protein.	Thioredoxin-like_fold domain-containing protein.	0.907
A0A1A0H6Y0	A0A1A0H211	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.937
A0A1A0H6Y0	A0A1A0H945	HDAC_interact domain-containing protein.	Histone deacetylase transcription modifier.	0.978
A0A1A0H6Y0	A0A1A0HA32	HDAC_interact domain-containing protein.	Chromatin modification-related protein.	0.870
A0A1A0H6Y0	A0A1A0HBW7	HDAC_interact domain-containing protein.	WD40 repeat-like protein.	0.745
A0A1A0H6Y0	A0A1A0HCZ6	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.538