(17 nodes) poly(A)+ mRNA export from nucleus network (Metschnikowia bicuspidata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1A0HKJ4	Uncharacterized protein. (510 aa)
	A0A1A0HKE2	Uncharacterized protein. (1156 aa)
	A0A1A0HKB6	NTF2-like protein. (599 aa)
	A0A1A0H4R2	GLE1-domain-containing protein. (501 aa)
	A0A1A0HID9	RanBD1 domain-containing protein. (446 aa)
	A0A1A0HI46	SAP domain-containing protein. (177 aa)
	A0A1A0HHE5	PCI domain-containing protein. (681 aa)
	A0A1A0HFQ6	Uncharacterized protein. (1186 aa)
	A0A1A0HFE6	Peptidase S59 domain-containing protein. (1401 aa)
	A0A1A0HFB5	NTF2-like protein. (189 aa)
	A0A1A0H9B3	WD40 repeat-like protein. (366 aa)
	A0A1A0H958	Uncharacterized protein. (474 aa)
	A0A1A0HJK4	TFIIS N-terminal domain-containing protein. (429 aa)
	A0A1A0H9L1	Bystin-domain-containing protein. (444 aa)
	A0A1A0HAA0	E3 ubiquitin-protein ligase. (762 aa)
	A0A1A0HAV0	DNA repair helicase rad25. (855 aa)
	A0A1A0H9G0	RNA-binding domain-containing protein. (484 aa)

Your Current Organism:

Metschnikowia bicuspidata

NCBI taxonomy Id: 869754
Other names: M. bicuspidata var. bicuspidata NRRL YB-4993, Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1A0H4R2	A0A1A0H9B3	GLE1-domain-containing protein.	WD40 repeat-like protein.	0.972
A0A1A0H4R2	A0A1A0HFE6	GLE1-domain-containing protein.	Peptidase S59 domain-containing protein.	0.828
A0A1A0H4R2	A0A1A0HID9	GLE1-domain-containing protein.	RanBD1 domain-containing protein.	0.996
A0A1A0H4R2	A0A1A0HKB6	GLE1-domain-containing protein.	NTF2-like protein.	0.866
A0A1A0H4R2	A0A1A0HKE2	GLE1-domain-containing protein.	Uncharacterized protein.	0.912
A0A1A0H4R2	A0A1A0HKJ4	GLE1-domain-containing protein.	Uncharacterized protein.	0.615
A0A1A0H958	A0A1A0HKB6	Uncharacterized protein.	NTF2-like protein.	0.506
A0A1A0H9B3	A0A1A0H4R2	WD40 repeat-like protein.	GLE1-domain-containing protein.	0.972
A0A1A0H9B3	A0A1A0H9G0	WD40 repeat-like protein.	RNA-binding domain-containing protein.	0.526
A0A1A0H9B3	A0A1A0HFE6	WD40 repeat-like protein.	Peptidase S59 domain-containing protein.	0.957
A0A1A0H9B3	A0A1A0HFQ6	WD40 repeat-like protein.	Uncharacterized protein.	0.521
A0A1A0H9B3	A0A1A0HHE5	WD40 repeat-like protein.	PCI domain-containing protein.	0.461
A0A1A0H9B3	A0A1A0HI46	WD40 repeat-like protein.	SAP domain-containing protein.	0.468
A0A1A0H9B3	A0A1A0HID9	WD40 repeat-like protein.	RanBD1 domain-containing protein.	0.998
A0A1A0H9B3	A0A1A0HKB6	WD40 repeat-like protein.	NTF2-like protein.	0.985
A0A1A0H9B3	A0A1A0HKE2	WD40 repeat-like protein.	Uncharacterized protein.	0.810
A0A1A0H9B3	A0A1A0HKJ4	WD40 repeat-like protein.	Uncharacterized protein.	0.623
A0A1A0H9G0	A0A1A0H9B3	RNA-binding domain-containing protein.	WD40 repeat-like protein.	0.526
A0A1A0H9G0	A0A1A0HAV0	RNA-binding domain-containing protein.	DNA repair helicase rad25.	0.437
A0A1A0H9G0	A0A1A0HID9	RNA-binding domain-containing protein.	RanBD1 domain-containing protein.	0.589