(6 nodes) HOPS complex network (Metschnikowia bicuspidata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1A0HF18	Vps8 domain-containing protein. (1366 aa)
	A0A1A0HD86	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (926 aa)
	A0A1A0H7Q9	Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family. (935 aa)
	A0A1A0HE78	Pep3_Vps18 domain-containing protein. (1062 aa)
	A0A1A0HKR7	TPR-like protein. (292 aa)
	A0A1A0HF44	CNH domain-containing protein. (1045 aa)

Your Current Organism:

Metschnikowia bicuspidata

NCBI taxonomy Id: 869754
Other names: M. bicuspidata var. bicuspidata NRRL YB-4993, Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1A0H7Q9	A0A1A0HD86	Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.998
A0A1A0H7Q9	A0A1A0HE78	Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.	Pep3_Vps18 domain-containing protein.	0.998
A0A1A0H7Q9	A0A1A0HF18	Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.	Vps8 domain-containing protein.	0.630
A0A1A0H7Q9	A0A1A0HF44	Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.	CNH domain-containing protein.	0.998
A0A1A0HD86	A0A1A0H7Q9	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.	0.998
A0A1A0HD86	A0A1A0HE78	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Pep3_Vps18 domain-containing protein.	0.998
A0A1A0HD86	A0A1A0HF18	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Vps8 domain-containing protein.	0.991
A0A1A0HD86	A0A1A0HF44	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	CNH domain-containing protein.	0.998
A0A1A0HE78	A0A1A0H7Q9	Pep3_Vps18 domain-containing protein.	Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.	0.998
A0A1A0HE78	A0A1A0HD86	Pep3_Vps18 domain-containing protein.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.998
A0A1A0HE78	A0A1A0HF18	Pep3_Vps18 domain-containing protein.	Vps8 domain-containing protein.	0.990
A0A1A0HE78	A0A1A0HF44	Pep3_Vps18 domain-containing protein.	CNH domain-containing protein.	0.998
A0A1A0HF18	A0A1A0H7Q9	Vps8 domain-containing protein.	Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.	0.630
A0A1A0HF18	A0A1A0HD86	Vps8 domain-containing protein.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.991
A0A1A0HF18	A0A1A0HE78	Vps8 domain-containing protein.	Pep3_Vps18 domain-containing protein.	0.990
A0A1A0HF18	A0A1A0HF44	Vps8 domain-containing protein.	CNH domain-containing protein.	0.966
A0A1A0HF44	A0A1A0H7Q9	CNH domain-containing protein.	Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.	0.998
A0A1A0HF44	A0A1A0HD86	CNH domain-containing protein.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.998
A0A1A0HF44	A0A1A0HE78	CNH domain-containing protein.	Pep3_Vps18 domain-containing protein.	0.998
A0A1A0HF44	A0A1A0HF18	CNH domain-containing protein.	Vps8 domain-containing protein.	0.966