12 items (Metschnikowia bicuspidata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1A0HDG9	Uncharacterized protein. (1202 aa)
	A0A1A0HD71	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	A0A1A0HC21	Uncharacterized protein. (1497 aa)
	A0A1A0H732	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	A0A1A0H8W9	NUP214 domain-containing protein. (1321 aa)
	A0A1A0H9R6	C3H1-type domain-containing protein. (482 aa)
	A0A1A0H945	Histone deacetylase transcription modifier. (521 aa)
	A0A1A0HA73	Uncharacterized protein. (453 aa)
	A0A1A0HID9	RanBD1 domain-containing protein. (446 aa)
	A0A1A0HGX2	PA14 domain-containing protein. (217 aa)
	A0A1A0HGG4	PA14 domain-containing protein. (210 aa)
	A0A1A0HGF5	Ubiquitin-like protein. (90 aa)

Your Current Organism:

Metschnikowia bicuspidata

NCBI taxonomy Id: 869754
Other names: M. bicuspidata var. bicuspidata NRRL YB-4993, Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1A0H732	A0A1A0H8W9	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	NUP214 domain-containing protein.	0.704
A0A1A0H732	A0A1A0H945	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Histone deacetylase transcription modifier.	0.659
A0A1A0H732	A0A1A0H9R6	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	C3H1-type domain-containing protein.	0.667
A0A1A0H732	A0A1A0HA73	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.561
A0A1A0H732	A0A1A0HC21	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.985
A0A1A0H732	A0A1A0HD71	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.758
A0A1A0H732	A0A1A0HDG9	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.989
A0A1A0H732	A0A1A0HGF5	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-like protein.	0.999
A0A1A0H732	A0A1A0HGG4	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	PA14 domain-containing protein.	0.621
A0A1A0H732	A0A1A0HGX2	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	PA14 domain-containing protein.	0.621
A0A1A0H732	A0A1A0HID9	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	RanBD1 domain-containing protein.	0.998
A0A1A0H8W9	A0A1A0H732	NUP214 domain-containing protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.704
A0A1A0H8W9	A0A1A0H945	NUP214 domain-containing protein.	Histone deacetylase transcription modifier.	0.536
A0A1A0H8W9	A0A1A0HDG9	NUP214 domain-containing protein.	Uncharacterized protein.	0.999
A0A1A0H8W9	A0A1A0HGF5	NUP214 domain-containing protein.	Ubiquitin-like protein.	0.616
A0A1A0H8W9	A0A1A0HGG4	NUP214 domain-containing protein.	PA14 domain-containing protein.	0.741
A0A1A0H8W9	A0A1A0HGX2	NUP214 domain-containing protein.	PA14 domain-containing protein.	0.741
A0A1A0H8W9	A0A1A0HID9	NUP214 domain-containing protein.	RanBD1 domain-containing protein.	0.999
A0A1A0H945	A0A1A0H732	Histone deacetylase transcription modifier.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.659
A0A1A0H945	A0A1A0H8W9	Histone deacetylase transcription modifier.	NUP214 domain-containing protein.	0.536