(49 nodes) Proteasome, and Proteasome assembly network (Ogataea parapolymorpha)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HPODL_02550	26S proteasome non-ATPase regulatory subunit 8. (266 aa)
	HPODL_02617	Proteasome activator BLM10. (1118 aa)
	HPODL_02999	Proteasome component ECM29. (1778 aa)
	HPODL_03086	26S proteasome regulatory subunit RPN7. (400 aa)
	HPODL_03173	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (256 aa)
	HPODL_02904	Pro-apoptotic serine protease NMA111. (976 aa)
	HPODL_03012	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (253 aa)
	HPODL_02416	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (438 aa)
	HPODL_02421	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (442 aa)
	HPODL_05371	Uncharacterized protein. (365 aa)
	HPODL_02618	Proteasome activator BLM10. (961 aa)
	HPODL_05293	Proteasome subunit beta type-6. (244 aa)
	HPODL_03019	Proteasome subunit beta type-3. (205 aa)
	HPODL_03839	Proteasome subunit beta. (194 aa)
	HPODL_01767	Uncharacterized protein. (123 aa)
	HPODL_04141	Proteasome subunit beta; Belongs to the peptidase T1B family. (274 aa)
	HPODL_01956	26S proteasome regulatory subunit rpn10. (259 aa)
	HPODL_04198	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (247 aa)
	HPODL_04248	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (398 aa)
	HPODL_03791	26S proteasome regulatory subunit RPN11. (310 aa)
	HPODL_03826	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (275 aa)
	HPODL_01541	Proteasome subunit beta type-1. (216 aa)
	HPODL_01702	26S proteasome regulatory subunit rpn6. (426 aa)
	HPODL_01711	26S proteasome regulatory subunit RPN8. (345 aa)
	HPODL_03304	26S proteasome regulatory subunit RPN5. (443 aa)
	HPODL_04342	Proteasome subunit beta type-5. (284 aa)
	HPODL_03559	26S proteasome regulatory subunit RPN13. (131 aa)
	HPODL_04384	Uncharacterized protein. (273 aa)
	HPODL_04468	26S proteasome regulatory subunit rpn3. (461 aa)
	HPODL_03360	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (253 aa)
	HPODL_04055	Uncharacterized protein. (285 aa)
	HPODL_00222	Proteasomal ATPase-associated factor 1. (369 aa)
	HPODL_03602	Proteasome assembly chaperone 2; Involved in 20S proteasome assembly. Belongs to the PSMG2 family. (274 aa)
	HPODL_03648	HSM3_N domain-containing protein. (453 aa)
	HPODL_01013	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (250 aa)
	HPODL_00690	Proteasome subunit beta type-2. (267 aa)
	HPODL_00417	FGGY-family pentulose kinase. (530 aa)
	HPODL_04655	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (252 aa)
	HPODL_00718	26S protease subunit RPT4; Belongs to the AAA ATPase family. (422 aa)
	HPODL_04800	Protein with ankyrin repeats. (239 aa)
	HPODL_04889	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (923 aa)
	HPODL_05030	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (955 aa)
	HPODL_02320	Putative proteasome regulatory particle subunit Rpt3; Belongs to the AAA ATPase family. (417 aa)
	HPODL_05012	Cop9 signalosome complex subunit 11. (432 aa)
	HPODL_00746	Non-ATPase regulatory subunit of the 26S proteasome. (401 aa)
	HPODL_05099	Proteasome maturation factor. (147 aa)
	HPODL_02229	Uncharacterized protein. (203 aa)
	HPODL_04565	Ubiquitin carboxyl-terminal hydrolase. (481 aa)
	HPODL_04642	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (426 aa)

Your Current Organism:

Ogataea parapolymorpha

NCBI taxonomy Id: 871575
Other names: Hansenula polymorpha DL-1, O. parapolymorpha DL-1, Ogataea parapolymorpha ATCC 26012, Ogataea parapolymorpha DL-1, Pichia angusta DL-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HPODL_00222	HPODL_00718	W1QFE8	W1QI56	Proteasomal ATPase-associated factor 1.	26S protease subunit RPT4; Belongs to the AAA ATPase family.	0.701
HPODL_00222	HPODL_00746	W1QFE8	W1QKN2	Proteasomal ATPase-associated factor 1.	Non-ATPase regulatory subunit of the 26S proteasome.	0.853
HPODL_00222	HPODL_01702	W1QFE8	W1QD43	Proteasomal ATPase-associated factor 1.	26S proteasome regulatory subunit rpn6.	0.719
HPODL_00222	HPODL_01711	W1QFE8	W1QD53	Proteasomal ATPase-associated factor 1.	26S proteasome regulatory subunit RPN8.	0.926
HPODL_00222	HPODL_01956	W1QFE8	W1QC15	Proteasomal ATPase-associated factor 1.	26S proteasome regulatory subunit rpn10.	0.714
HPODL_00222	HPODL_02229	W1QFE8	W1QKT0	Proteasomal ATPase-associated factor 1.	Uncharacterized protein.	0.724
HPODL_00222	HPODL_02320	W1QFE8	W1QK45	Proteasomal ATPase-associated factor 1.	Putative proteasome regulatory particle subunit Rpt3; Belongs to the AAA ATPase family.	0.933
HPODL_00222	HPODL_02416	W1QFE8	W1Q8U3	Proteasomal ATPase-associated factor 1.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.817
HPODL_00222	HPODL_02421	W1QFE8	W1Q8U7	Proteasomal ATPase-associated factor 1.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.927
HPODL_00222	HPODL_02550	W1QFE8	W1Q6W2	Proteasomal ATPase-associated factor 1.	26S proteasome non-ATPase regulatory subunit 8.	0.585
HPODL_00222	HPODL_02999	W1QFE8	W1Q7L8	Proteasomal ATPase-associated factor 1.	Proteasome component ECM29.	0.466
HPODL_00222	HPODL_03086	W1QFE8	W1Q7V2	Proteasomal ATPase-associated factor 1.	26S proteasome regulatory subunit RPN7.	0.559
HPODL_00222	HPODL_03304	W1QFE8	W1QD79	Proteasomal ATPase-associated factor 1.	26S proteasome regulatory subunit RPN5.	0.906
HPODL_00222	HPODL_03559	W1QFE8	W1QDZ5	Proteasomal ATPase-associated factor 1.	26S proteasome regulatory subunit RPN13.	0.542
HPODL_00222	HPODL_03648	W1QFE8	W1QFJ1	Proteasomal ATPase-associated factor 1.	HSM3_N domain-containing protein.	0.744
HPODL_00222	HPODL_03791	W1QFE8	W1QC82	Proteasomal ATPase-associated factor 1.	26S proteasome regulatory subunit RPN11.	0.924
HPODL_00222	HPODL_04248	W1QFE8	W1QC56	Proteasomal ATPase-associated factor 1.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.989
HPODL_00222	HPODL_04468	W1QFE8	W1QE56	Proteasomal ATPase-associated factor 1.	26S proteasome regulatory subunit rpn3.	0.800
HPODL_00222	HPODL_04565	W1QFE8	W1QKX5	Proteasomal ATPase-associated factor 1.	Ubiquitin carboxyl-terminal hydrolase.	0.455
HPODL_00222	HPODL_04642	W1QFE8	W1QL25	Proteasomal ATPase-associated factor 1.	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.	0.915

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