STRINGSTRING
HPODL_05376 HPODL_05376 HPODL_02923 HPODL_02923 HPODL_02957 HPODL_02957 HPODL_03129 HPODL_03129 HPODL_01490 HPODL_01490 HPODL_01237 HPODL_01237 HPODL_01492 HPODL_01492 HPODL_01375 HPODL_01375 HPODL_03890 HPODL_03890 HPODL_04373 HPODL_04373 HPODL_01076 HPODL_01076 HPODL_00392 HPODL_00392 HPODL_00451 HPODL_00451 HPODL_00194 HPODL_00194 HPODL_04657 HPODL_04657 HPODL_04728 HPODL_04728 HPODL_05092 HPODL_05092 HPODL_02120 HPODL_02120 HPODL_02340 HPODL_02340 HPODL_05078 HPODL_05078 HPODL_02070 HPODL_02070 HPODL_00846 HPODL_00846
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HPODL_05376Uncharacterized protein. (76 aa)
HPODL_0292340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (235 aa)
HPODL_0295754S ribosomal protein IMG1, mitochondrial. (145 aa)
HPODL_03129Mitochondrial ribosomal protein of the small subunit. (247 aa)
HPODL_0149054S ribosomal protein L9, mitochondrial; Belongs to the universal ribosomal protein uL3 family. (272 aa)
HPODL_01237Mitochondrial ribosomal protein of the large subunit; Belongs to the bacterial ribosomal protein bL17 family. (208 aa)
HPODL_0149254S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family. (212 aa)
HPODL_0137554S ribosomal protein L10, mitochondrial. (262 aa)
HPODL_0389054S ribosomal protein L23, mitochondrial. (176 aa)
HPODL_0437354S ribosomal protein RML2, mitochondrial. (360 aa)
HPODL_01076Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (142 aa)
HPODL_00392Mitochondrial ribosomal protein of the large subunit; Belongs to the universal ribosomal protein uL22 family. (265 aa)
HPODL_00451Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (434 aa)
HPODL_0019454S ribosomal protein L2, mitochondrial. (376 aa)
HPODL_04657Fucose permease. (174 aa)
HPODL_0472854S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. (225 aa)
HPODL_05092Putative secreted protein. (168 aa)
HPODL_02120Uncharacterized protein. (262 aa)
HPODL_0234060S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. (141 aa)
HPODL_0507854S ribosomal protein L24, mitochondrial. (260 aa)
HPODL_0207054S ribosomal protein L7, mitochondrial. (299 aa)
HPODL_0084660S ribosomal protein L5. (298 aa)
Your Current Organism:
Ogataea parapolymorpha
NCBI taxonomy Id: 871575
Other names: Hansenula polymorpha DL-1, O. parapolymorpha DL-1, Ogataea parapolymorpha ATCC 26012, Ogataea parapolymorpha DL-1, Pichia angusta DL-1
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