STRINGSTRING
HPODL_02998 HPODL_02998 HPODL_02633 HPODL_02633 HPODL_00764 HPODL_00764 HPODL_04598 HPODL_04598 HPODL_00184 HPODL_00184
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HPODL_02998Polyubiquitin-A. (761 aa)
HPODL_02633Ubiquitin-protein ligase (E3) that interacts with Rpt4p and Rpt6p. (1583 aa)
HPODL_00764Belongs to the ubiquitin-conjugating enzyme family. (230 aa)
HPODL_04598Ubiquitin-conjugating enzyme E2 4; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
HPODL_00184Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family. (1024 aa)
Your Current Organism:
Ogataea parapolymorpha
NCBI taxonomy Id: 871575
Other names: Hansenula polymorpha DL-1, O. parapolymorpha DL-1, Ogataea parapolymorpha ATCC 26012, Ogataea parapolymorpha DL-1, Pichia angusta DL-1
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