STRINGSTRING
HPODL_05342 HPODL_05342 HPODL_00651 HPODL_00651 HPODL_04952 HPODL_04952 HPODL_02297 HPODL_02297 HPODL_05139 HPODL_05139 HPODL_01839 HPODL_01839 HPODL_03409 HPODL_03409 HPODL_00475 HPODL_00475 HPODL_00264 HPODL_00264 HPODL_00394 HPODL_00394 HPODL_04749 HPODL_04749 HPODL_04768 HPODL_04768 HPODL_02925 HPODL_02925 HPODL_02655 HPODL_02655 HPODL_04586 HPODL_04586 HPODL_00458 HPODL_00458
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HPODL_05342RING-type domain-containing protein. (115 aa)
HPODL_00651F-box protein pof9. (474 aa)
HPODL_04952Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (228 aa)
HPODL_02297Uncharacterized protein. (539 aa)
HPODL_05139Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (221 aa)
HPODL_01839F-box protein HRT3. (386 aa)
HPODL_03409Cell division control protein 4. (718 aa)
HPODL_00475E3 ubiquitin ligase complex SCF subunit sconB. (607 aa)
HPODL_00264F-box protein. (424 aa)
HPODL_00394CULLIN_2 domain-containing protein; Belongs to the cullin family. (783 aa)
HPODL_04749F-box/LRR-repeat protein 13. (955 aa)
HPODL_04768Cullin; Belongs to the cullin family. (779 aa)
HPODL_02925Uncharacterized protein. (572 aa)
HPODL_02655F-box protein component of the SCF ubiquitin-ligase complex. (696 aa)
HPODL_04586F-box/WD repeat-containing protein pof10. (594 aa)
HPODL_00458Suppressor of kinetochore protein 1; Belongs to the SKP1 family. (173 aa)
Your Current Organism:
Ogataea parapolymorpha
NCBI taxonomy Id: 871575
Other names: Hansenula polymorpha DL-1, O. parapolymorpha DL-1, Ogataea parapolymorpha ATCC 26012, Ogataea parapolymorpha DL-1, Pichia angusta DL-1
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