STRINGSTRING
HPODL_01435 HPODL_01435 HPODL_02708 HPODL_02708 HPODL_02546 HPODL_02546 HPODL_02595 HPODL_02595 HPODL_03222 HPODL_03222 HPODL_01519 HPODL_01519 HPODL_02286 HPODL_02286 HPODL_00038 HPODL_00038 HPODL_00042 HPODL_00042 HPODL_04745 HPODL_04745 HPODL_00942 HPODL_00942 HPODL_00117 HPODL_00117 HPODL_05051 HPODL_05051 HPODL_00277 HPODL_00277 HPODL_00074 HPODL_00074 HPODL_01655 HPODL_01655 HPODL_05346 HPODL_05346 HPODL_05221 HPODL_05221 HPODL_05126 HPODL_05126 HPODL_00751 HPODL_00751 HPODL_04944 HPODL_04944 HPODL_04548 HPODL_04548 HPODL_00627 HPODL_00627 HPODL_02340 HPODL_02340 HPODL_00790 HPODL_00790 HPODL_04228 HPODL_04228 HPODL_03991 HPODL_03991 HPODL_03725 HPODL_03725 HPODL_03482 HPODL_03482 HPODL_04292 HPODL_04292 HPODL_00846 HPODL_00846 HPODL_04293 HPODL_04293 HPODL_04435 HPODL_04435 HPODL_01852 HPODL_01852 HPODL_03932 HPODL_03932
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HPODL_01435Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
HPODL_02708Putative GTPase involved in 60S ribosomal subunit biogenesis. (690 aa)
HPODL_0254660S ribosomal protein L16-B; Belongs to the universal ribosomal protein uL13 family. (200 aa)
HPODL_0259560S ribosomal protein L34-A. (116 aa)
HPODL_0322260S ribosomal protein L30. (108 aa)
HPODL_01519Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (78 aa)
HPODL_0228660S ribosomal protein L8-B. (267 aa)
HPODL_0003860S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (99 aa)
HPODL_0004260S ribosomal protein L7. (243 aa)
HPODL_0474560S ribosomal protein L6-A. (174 aa)
HPODL_0094260S acidic ribosomal protein P2-beta; Belongs to the eukaryotic ribosomal protein P1/P2 family. (109 aa)
HPODL_0011760S ribosomal protein L22. (120 aa)
HPODL_05051Uncharacterized protein. (474 aa)
HPODL_0027760S ribosomal protein L10. (219 aa)
HPODL_0007460S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome t [...] (311 aa)
HPODL_0165560S ribosomal protein L26-B. (127 aa)
HPODL_0534660S ribosomal protein L21-B. (157 aa)
HPODL_05221Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (142 aa)
HPODL_0512660S ribosomal protein L35. (120 aa)
HPODL_0075160S ribosomal protein L8-B. (251 aa)
HPODL_0494460S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (389 aa)
HPODL_04548Zn(2)-C6 fungal-type domain-containing protein. (637 aa)
HPODL_0062760S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (174 aa)
HPODL_0234060S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. (141 aa)
HPODL_0079060S ribosomal protein L32. (131 aa)
HPODL_04228Large subunit ribosomal protein LP1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (105 aa)
HPODL_0399160S ribosomal protein L27. (136 aa)
HPODL_03725Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (193 aa)
HPODL_0348260S ribosomal protein L4-B. (357 aa)
HPODL_0429260S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (197 aa)
HPODL_0084660S ribosomal protein L5. (298 aa)
HPODL_0429360S acidic ribosomal protein P1-alpha; Belongs to the eukaryotic ribosomal protein P1/P2 family. (108 aa)
HPODL_0443560S ribosomal protein L33. (107 aa)
HPODL_0185260S ribosomal protein L14. (132 aa)
HPODL_0393260S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. (147 aa)
Your Current Organism:
Ogataea parapolymorpha
NCBI taxonomy Id: 871575
Other names: Hansenula polymorpha DL-1, O. parapolymorpha DL-1, Ogataea parapolymorpha ATCC 26012, Ogataea parapolymorpha DL-1, Pichia angusta DL-1
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