STRINGSTRING
HPODL_03750 HPODL_03750 HPODL_02504 HPODL_02504 HPODL_01915 HPODL_01915 HPODL_04087 HPODL_04087 HPODL_03367 HPODL_03367 HPODL_04919 HPODL_04919 HPODL_00032 HPODL_00032
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HPODL_03750E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1802 aa)
HPODL_02504Cell division control protein 48; Belongs to the AAA ATPase family. (832 aa)
HPODL_01915Ubiquitin fusion degradation protein 1. (357 aa)
HPODL_04087Uncharacterized protein. (940 aa)
HPODL_03367Uncharacterized protein. (589 aa)
HPODL_04919zf-C2HC5 domain-containing protein. (425 aa)
HPODL_00032RING-type domain-containing protein. (1451 aa)
Your Current Organism:
Ogataea parapolymorpha
NCBI taxonomy Id: 871575
Other names: Hansenula polymorpha DL-1, O. parapolymorpha DL-1, Ogataea parapolymorpha ATCC 26012, Ogataea parapolymorpha DL-1, Pichia angusta DL-1
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