STRINGSTRING
HPODL_02708 HPODL_02708 HPODL_00790 HPODL_00790 HPODL_02340 HPODL_02340 HPODL_04548 HPODL_04548 HPODL_00751 HPODL_00751 HPODL_00752 HPODL_00752 HPODL_05126 HPODL_05126 HPODL_04663 HPODL_04663 HPODL_05150 HPODL_05150 HPODL_00596 HPODL_00596 HPODL_03991 HPODL_03991 HPODL_04370 HPODL_04370 HPODL_04341 HPODL_04341 HPODL_03353 HPODL_03353 HPODL_04105 HPODL_04105 HPODL_04435 HPODL_04435 HPODL_03932 HPODL_03932 HPODL_01435 HPODL_01435 HPODL_05346 HPODL_05346 HPODL_01524 HPODL_01524 HPODL_03222 HPODL_03222 HPODL_01195 HPODL_01195 HPODL_03223 HPODL_03223 HPODL_02705 HPODL_02705 HPODL_02646 HPODL_02646 HPODL_00846 HPODL_00846 HPODL_02286 HPODL_02286 HPODL_00038 HPODL_00038 HPODL_00117 HPODL_00117 HPODL_05051 HPODL_05051 HPODL_00074 HPODL_00074
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HPODL_02708Putative GTPase involved in 60S ribosomal subunit biogenesis. (690 aa)
HPODL_0079060S ribosomal protein L32. (131 aa)
HPODL_0234060S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. (141 aa)
HPODL_04548Zn(2)-C6 fungal-type domain-containing protein. (637 aa)
HPODL_0075160S ribosomal protein L8-B. (251 aa)
HPODL_0075260S ribosomal protein L2. (255 aa)
HPODL_0512660S ribosomal protein L35. (120 aa)
HPODL_0466360S ribosomal protein L18-A. (186 aa)
HPODL_05150Ribosomal protein L37; Binds to the 23S rRNA. (82 aa)
HPODL_0059660S ribosomal protein L31. (115 aa)
HPODL_0399160S ribosomal protein L27. (136 aa)
HPODL_0437060S ribosomal protein L12-A; Belongs to the universal ribosomal protein uL11 family. (165 aa)
HPODL_0434160S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (171 aa)
HPODL_0335360S ribosomal protein L9-B. (190 aa)
HPODL_0410560S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
HPODL_0443560S ribosomal protein L33. (107 aa)
HPODL_0393260S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. (147 aa)
HPODL_01435Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
HPODL_0534660S ribosomal protein L21-B. (157 aa)
HPODL_0152460S ribosomal protein L9-B. (191 aa)
HPODL_0322260S ribosomal protein L30. (108 aa)
HPODL_01195Ubiquitin-60S ribosomal protein L40. (128 aa)
HPODL_0322360S ribosomal protein L24. (154 aa)
HPODL_02705Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
HPODL_0264660S ribosomal protein L43. (135 aa)
HPODL_0084660S ribosomal protein L5. (298 aa)
HPODL_0228660S ribosomal protein L8-B. (267 aa)
HPODL_0003860S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (99 aa)
HPODL_0011760S ribosomal protein L22. (120 aa)
HPODL_05051Uncharacterized protein. (474 aa)
HPODL_0007460S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome t [...] (311 aa)
Your Current Organism:
Ogataea parapolymorpha
NCBI taxonomy Id: 871575
Other names: Hansenula polymorpha DL-1, O. parapolymorpha DL-1, Ogataea parapolymorpha ATCC 26012, Ogataea parapolymorpha DL-1, Pichia angusta DL-1
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