Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dinP | dnaE | BDGL_003109 | BDGL_000846 | DNA polymerase IV, devoid of proofreading, damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | DNA polymerase III, alpha chain. | 0.473 |
| dinP | dnaN | BDGL_003109 | BDGL_002431 | DNA polymerase IV, devoid of proofreading, damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | DNA polymerase III, beta chain. | 0.733 |
| dinP | dnaN-2 | BDGL_003109 | BDGL_002432 | DNA polymerase IV, devoid of proofreading, damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | DNA polymerase III, beta chain. | 0.733 |
| dinP | holB | BDGL_003109 | BDGL_000948 | DNA polymerase IV, devoid of proofreading, damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | DNA polymerase III, delta prime subunit. | 0.524 |
| dinP | polA | BDGL_003109 | BDGL_003519 | DNA polymerase IV, devoid of proofreading, damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.653 |
| dnaE | dinP | BDGL_000846 | BDGL_003109 | DNA polymerase III, alpha chain. | DNA polymerase IV, devoid of proofreading, damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.473 |
| dnaE | dnaN | BDGL_000846 | BDGL_002431 | DNA polymerase III, alpha chain. | DNA polymerase III, beta chain. | 0.784 |
| dnaE | dnaN-2 | BDGL_000846 | BDGL_002432 | DNA polymerase III, alpha chain. | DNA polymerase III, beta chain. | 0.988 |
| dnaE | dnaQ | BDGL_000846 | BDGL_000336 | DNA polymerase III, alpha chain. | Bifunctional protein dnaQ; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.990 |
| dnaE | dnaX | BDGL_000846 | BDGL_001527 | DNA polymerase III, alpha chain. | DNA polymerase III, tau and gamma subunits (DNA elongation factor III); DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.993 |
| dnaE | holA | BDGL_000846 | BDGL_003450 | DNA polymerase III, alpha chain. | Putative DNA polymerase III, delta subunit. | 0.992 |
| dnaE | holB | BDGL_000846 | BDGL_000948 | DNA polymerase III, alpha chain. | DNA polymerase III, delta prime subunit. | 0.992 |
| dnaE | holC | BDGL_000846 | BDGL_003139 | DNA polymerase III, alpha chain. | DNA polymerase III, chi subunit. | 0.988 |
| dnaE | impB | BDGL_000846 | BDGL_001504 | DNA polymerase III, alpha chain. | DNA-directed DNA polymerase. | 0.473 |
| dnaE | polA | BDGL_000846 | BDGL_003519 | DNA polymerase III, alpha chain. | DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.688 |
| dnaN | dinP | BDGL_002431 | BDGL_003109 | DNA polymerase III, beta chain. | DNA polymerase IV, devoid of proofreading, damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.733 |
| dnaN | dnaE | BDGL_002431 | BDGL_000846 | DNA polymerase III, beta chain. | DNA polymerase III, alpha chain. | 0.784 |
| dnaN | dnaN-2 | BDGL_002431 | BDGL_002432 | DNA polymerase III, beta chain. | DNA polymerase III, beta chain. | 0.986 |
| dnaN | dnaQ | BDGL_002431 | BDGL_000336 | DNA polymerase III, beta chain. | Bifunctional protein dnaQ; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.786 |
| dnaN | dnaX | BDGL_002431 | BDGL_001527 | DNA polymerase III, beta chain. | DNA polymerase III, tau and gamma subunits (DNA elongation factor III); DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.861 |
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