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| | ADY84157.1 | Hypothetical protein. (182 aa) |
| | ADY84180.1 | Hypothetical protein. (214 aa) |
| | ADY80629.1 | Hypothetical protein. (189 aa) |
| | ADY80634.1 | Hypothetical protein. (166 aa) |
| | smc | Putative chromosome segregation ATPase; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1149 aa) |
| | rpmF | 50S ribosomal protein; Belongs to the bacterial ribosomal protein bL32 family. (61 aa) |
| | rplY | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. (98 aa) |
| | ispE | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (277 aa) |
| | hemA | Glutamyl tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (349 aa) |
| | hemA-2 | Glutamyl tRNA reductase. (61 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. (622 aa) |
| | rpsL | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (124 aa) |
| | rpsG | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | betI | Transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes. (211 aa) |
| | ADY80938.1 | Hypothetical protein. (223 aa) |
| | ADY81002.1 | Hypothetical protein. (206 aa) |
| | ADY81038.1 | Hypothetical protein. (114 aa) |
| | hrpA | ATP-dependent helicase. (1311 aa) |
| | ADY81067.1 | Hypothetical protein. (135 aa) |
| | ADY81088.1 | Hypothetical protein. (186 aa) |
| | ADY81192.1 | Hypothetical protein. (175 aa) |
| | paaH | 3-hydroxybutyryl-CoA dehydrogenase. (512 aa) |
| | phnW | Aminotransferase, class V; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (395 aa) |
| | dcaH | 3-hydroxybutyryl-CoA dehydrogenase. (508 aa) |
| | ADY81338.1 | Transcriptional regulator, TetR family. (197 aa) |
| | ADY81389.1 | Hypothetical protein. (211 aa) |
| | ADY81468.1 | Hypothetical protein. (190 aa) |
| | ADY81515.1 | Hypothetical protein. (187 aa) |
| | xseA-2 | Exodeoxyribonuclease VII large subunit. (387 aa) |
| | spoOJ | Chromosome partitioning protein; Belongs to the ParB family. (292 aa) |
| | ADY81537.1 | Hypothetical protein. (202 aa) |
| | ADY81542.1 | 6-pyruvoyl-tetrahydropterin synthase-like protein. (198 aa) |
| | rpsA | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (557 aa) |
| | himD | Integration host factor (IHF),beta subunit, site specific recombination; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (100 aa) |
| | ADY81570.1 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. (244 aa) |
| | rpsT | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa) |
| | ADY81627.1 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (109 aa) |
| | recR | Recombination protein, gap repair; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (198 aa) |
| | acoA | Acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit. (320 aa) |
| | ADY81726.1 | Hypothetical protein. (144 aa) |
| | ADY81878.1 | Hypothetical protein. (218 aa) |
| | yhgD | Transcriptional regulator, TetR family. (189 aa) |
| | clpS | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (137 aa) |
| | preP2 | Putative metalloprotease. (984 aa) |
| | ADY82019.1 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. (184 aa) |
| | dnaX | DNA polymerase III, tau and gamma subunits (DNA elongation factor III); DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (685 aa) |
| | eutC | Ethanolamine ammonia-lyase light chain; Belongs to the EutC family. (271 aa) |
| | miaA | Delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (314 aa) |
| | rpsF | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (127 aa) |
| | rpsR | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (75 aa) |
| | rplI | 50S ribosomal protein L9; Binds to the 23S rRNA. (148 aa) |
| | dnaB | Replicative DNA helicase;chromosome replication, chain elongation; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (481 aa) |
| | fis | Fis family transcriptional regulator, factor for inversion stimulation protein; DNA-binding protein for site-specific recombination, transcription of rRNA and tRNA operons and DNA replication; Belongs to the transcriptional regulatory Fis family. (70 aa) |
| | ADY82269.1 | Hypothetical protein. (186 aa) |
| | rpsU | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (71 aa) |
| | rpsB | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (250 aa) |
| | ADY82422.1 | Hypothetical protein. (147 aa) |
| | rpmE | 50S ribosomal protein L31; Binds the 23S rRNA. (74 aa) |
| | phrB | Deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding protein; Belongs to the DNA photolyase family. (480 aa) |
| | recO | DNA repair protein; Involved in DNA repair and RecF pathway recombination. (227 aa) |
| | ADY82597.1 | Conserved hypothetical protein. (228 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Belongs to the DnaA family. HdA subfamily. (232 aa) |
| | gyrA | DNA gyrase, subunit A, type II topoisomerase; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP- [...] (904 aa) |
| | ADY82669.1 | Transcriptional regulator, TetR family. (205 aa) |
| | jmjD5 | Aspartate beta-hydroxylase. (396 aa) |
| | rpmA | 50S ribosomal protein L27. (66 aa) |
| | rplU | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa) |
| | ADY82774.1 | Hypothetical protein; Belongs to the UPF0145 family. (116 aa) |
| | ADY82775.1 | Hypothetical protein; Belongs to the UPF0145 family. (144 aa) |
| | ADY82877.1 | Putative 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family. (188 aa) |
| | ADY82924.1 | Putative cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (192 aa) |
| | ADY82928.1 | Hypothetical protein. (480 aa) |
| | ADY82954.1 | Hypothetical protein. (296 aa) |
| | rpmH | 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | rplM | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa) |
| | rpsI | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (128 aa) |
| | sspB | ClpXP protease specificity-enhancing factor. (144 aa) |
| | ADY83060.1 | Hypothetical protein. (601 aa) |
| | ADY83061.1 | Transcriptional regulator, TetR family. (199 aa) |
| | ADY83068.1 | Hypothetical protein. (201 aa) |
| | rplQ | 50S ribosomal protein L17. (125 aa) |
| | rpsD | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (208 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (128 aa) |
| | rpsM | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (118 aa) |
| | rpmJ | Ribosomal protein L36 family protein; Belongs to the bacterial ribosomal protein bL36 family. (38 aa) |
| | rplO | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (146 aa) |
| | rpmD | 50S ribosomal protein L30. (58 aa) |
| | rpsE | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (165 aa) |
| | rplR | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (116 aa) |
| | rplF | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa) |
| | rpsH | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (131 aa) |
| | rpsN | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rplE | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (178 aa) |
| | rplX | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (105 aa) |
| | rplN | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rpsQ | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (68 aa) |
| | rpmC | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (65 aa) |
| | rplP | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (126 aa) |
| | rpsC | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (265 aa) |
| | rplV | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (109 aa) |
| | rpsS | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (91 aa) |
| | rplB | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (274 aa) |
| | rplW | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (106 aa) |
| | rplD | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (200 aa) |
| | rplC | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (212 aa) |
| | rpsJ | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (111 aa) |
| | rplS | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (122 aa) |
| | rimM | 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (182 aa) |
| | rpsP | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (83 aa) |
| | ADY83323.1 | Hypothetical protein. (127 aa) |
| | ADY83404.1 | Hypothetical protein. (119 aa) |
| | uao | Putative allantoicase. (167 aa) |
| | alc | Allantoicase; Belongs to the allantoicase family. (336 aa) |
| | parE | Topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (627 aa) |
| | ADY83424.1 | Hypothetical protein. (179 aa) |
| | ADY83430.1 | Hypothetical protein. (223 aa) |
| | rarA | Putative ATPase. (421 aa) |
| | ADY83500.1 | Hypothetical protein. (217 aa) |
| | ADY83512.1 | Hypothetical protein. (429 aa) |
| | ribF | Bifunctional protein ribF; Belongs to the ribF family. (333 aa) |
| | prpB | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (294 aa) |
| | ADY83680.1 | Hypothetical protein. (189 aa) |
| | parC | DNA topoisomerase IV, subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (739 aa) |
| | ADY83712.1 | Hypothetical protein. (258 aa) |
| | holC | DNA polymerase III, chi subunit. (135 aa) |
| | ADY83750.1 | Hypothetical protein. (193 aa) |
| | rplK | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (142 aa) |
| | rplA | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (231 aa) |
| | rplJ | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (168 aa) |
| | rplL | 50S ribosomal protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (123 aa) |
| | recN | Protein used in recombination and DNA repair; May be involved in recombinational repair of damaged DNA. (555 aa) |
| | rpsO | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa) |
| | priA | Primosomal protein, ATP-dependent; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (742 aa) |
| | etfD | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (570 aa) |
| | ADY83882.1 | Hypothetical protein. (136 aa) |
| | rpmE2 | 50S ribosomal protein L31 type B. (84 aa) |
| | topA | DNA topoisomerase type I, omega protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, th [...] (878 aa) |
| | rpmG | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (51 aa) |
| | rpmB | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (78 aa) |
| | ADY83948.1 | Hypothetical protein. (171 aa) |
| | ADY83960.1 | Non-specific serine/threonine protein kinase. (256 aa) |
| | idnK | Entner-Doudoroff pathway;gntK; thermoresistant gluconokinase (gluconate kinase). (170 aa) |
| | ADY84043.1 | Hypothetical protein. (92 aa) |
| | rpmI | 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (64 aa) |
| | rplT | rplT; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (119 aa) |
| | rpoX | Putative sigma(54) modulation protein RpoX. (112 aa) |
