Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ27530.1 | EGJ27592.1 | STRPO_0908 | STRPO_1873 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF08455. | Helicase C-terminal domain protein; Identified by match to protein family HMM PF00271; match to protein family HMM PF04851. | 0.775 |
| EGJ27530.1 | dinB | STRPO_0908 | STRPO_1121 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF08455. | Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.530 |
| EGJ27530.1 | dinG | STRPO_0908 | STRPO_0656 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF08455. | Exonuclease DnaQ family/helicase DinG family; 3'-5' exonuclease. | 0.875 |
| EGJ27530.1 | pcrA | STRPO_0908 | STRPO_0327 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF08455. | ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580; match to protein family HMM TIGR01073. | 0.670 |
| EGJ27530.1 | recA | STRPO_0908 | STRPO_1325 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF08455. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.869 |
| EGJ27592.1 | EGJ27530.1 | STRPO_1873 | STRPO_0908 | Helicase C-terminal domain protein; Identified by match to protein family HMM PF00271; match to protein family HMM PF04851. | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF08455. | 0.775 |
| EGJ27592.1 | dinG | STRPO_1873 | STRPO_0656 | Helicase C-terminal domain protein; Identified by match to protein family HMM PF00271; match to protein family HMM PF04851. | Exonuclease DnaQ family/helicase DinG family; 3'-5' exonuclease. | 0.983 |
| EGJ27726.1 | dinB | STRPO_0248 | STRPO_1121 | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381. | Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.840 |
| EGJ27726.1 | dinG | STRPO_0248 | STRPO_0656 | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381. | Exonuclease DnaQ family/helicase DinG family; 3'-5' exonuclease. | 0.561 |
| EGJ27726.1 | pcrA | STRPO_0248 | STRPO_0327 | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381. | ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580; match to protein family HMM TIGR01073. | 0.770 |
| EGJ27726.1 | recA | STRPO_0248 | STRPO_1325 | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.980 |
| dinB | EGJ27530.1 | STRPO_1121 | STRPO_0908 | Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF08455. | 0.530 |
| dinB | EGJ27726.1 | STRPO_1121 | STRPO_0248 | Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381. | 0.840 |
| dinB | dinG | STRPO_1121 | STRPO_0656 | Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | Exonuclease DnaQ family/helicase DinG family; 3'-5' exonuclease. | 0.765 |
| dinB | recA | STRPO_1121 | STRPO_1325 | Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.864 |
| dinG | EGJ27530.1 | STRPO_0656 | STRPO_0908 | Exonuclease DnaQ family/helicase DinG family; 3'-5' exonuclease. | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF08455. | 0.875 |
| dinG | EGJ27592.1 | STRPO_0656 | STRPO_1873 | Exonuclease DnaQ family/helicase DinG family; 3'-5' exonuclease. | Helicase C-terminal domain protein; Identified by match to protein family HMM PF00271; match to protein family HMM PF04851. | 0.983 |
| dinG | EGJ27726.1 | STRPO_0656 | STRPO_0248 | Exonuclease DnaQ family/helicase DinG family; 3'-5' exonuclease. | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381. | 0.561 |
| dinG | dinB | STRPO_0656 | STRPO_1121 | Exonuclease DnaQ family/helicase DinG family; 3'-5' exonuclease. | Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.765 |
| dinG | pcrA | STRPO_0656 | STRPO_0327 | Exonuclease DnaQ family/helicase DinG family; 3'-5' exonuclease. | ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580; match to protein family HMM TIGR01073. | 0.862 |
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