STRINGSTRING
ADZ08841.1 ADZ08841.1 hisC hisC ADZ10057.1 ADZ10057.1 ADZ09428.1 ADZ09428.1 dapL dapL ADZ08964.1 ADZ08964.1 ADZ08962.1 ADZ08962.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADZ08841.1KEGG: mmg:MTBMA_c02720 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII. (390 aa)
hisCPFAM: Aminotransferase, class I/classII; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: mth:MTH1587 histidinol-phosphate aminotransferase. (366 aa)
ADZ10057.1Aspartate 4-decarboxylase; KEGG: sna:Snas_3840 aminotransferase class I and II; TIGRFAM: Aspartate 4-decarboxylase; PFAM: Aminotransferase, class I/classII. (546 aa)
ADZ09428.1Cystathionine beta-lyase; KEGG: dly:Dehly_0142 class I and II aminotransferase; PFAM: Aminotransferase, class I/classII. (400 aa)
dapLLL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. (411 aa)
ADZ08964.1KEGG: mmg:MTBMA_c04630 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII. (372 aa)
ADZ08962.1Putative transcriptional regulator, GntR family; KEGG: rci:RRC4 putative aminotransferase; PFAM: Aminotransferase, class I/classII. (392 aa)
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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