STRINGSTRING
ADZ08818.1 ADZ08818.1 ADZ08920.1 ADZ08920.1 ADZ09255.1 ADZ09255.1 ADZ09939.1 ADZ09939.1 ADZ10118.1 ADZ10118.1 ADZ10324.1 ADZ10324.1 ADZ10668.1 ADZ10668.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADZ08818.1TIGRFAM: Acetate-CoA ligase; KEGG: mmg:MTBMA_c01900 acetyl-coenzyme A synthetase; PFAM: AMP-dependent synthetase/ligase. (649 aa)
ADZ08920.1Phenylacetate--CoA ligase; KEGG: mth:MTH161 coenzyme F390 synthetase III; PFAM: AMP-dependent synthetase/ligase. (432 aa)
ADZ09255.1Phenylacetate--CoA ligase; KEGG: mmg:MTBMA_c04250 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase/ligase. (432 aa)
ADZ09939.1acetate/CoA ligase; PFAM: AMP-dependent synthetase/ligase; manually curated; KEGG: mth:MTH217 acetyl-CoA synthetase; TIGRFAM: Acetate-CoA ligase. (634 aa)
ADZ10118.1TIGRFAM: Acetate-CoA ligase; KEGG: mfv:Mfer_0074 acetyl-coenzyme a synthetase; PFAM: AMP-dependent synthetase/ligase. (633 aa)
ADZ10324.1Long-chain-fatty-acid--CoA ligase; KEGG: mth:MTH657 AMP-binding domain protein; PFAM: AMP-dependent synthetase/ligase. (552 aa)
ADZ10668.1Butyrate--CoA ligase; KEGG: mba:Mbar_A2172 AMP-binding protein; PFAM: AMP-dependent synthetase/ligase. (557 aa)
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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