(16 nodes) Mixed, incl. Spermidine/putrescine-binding periplasmic protein, and ABC-type polyamine transporter activity network (Shinella sp. HZN7)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	potA-3	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (363 aa)
	shn_10755	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
	shn_10760	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
	shn_10765	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
	fbpC	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (359 aa)
	shn_12015	Potassium transporter Trk; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
	shn_12020	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	shn_12025	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
	shn_16765	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	shn_16770	Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
	potA-4	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (369 aa)
	shn_16780	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
	shn_17210	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	shn_17215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	shn_17220	Spermidine/putrecine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (342 aa)
	potA-5	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (374 aa)

Your Current Organism:

Shinella sp. HZN7

NCBI taxonomy Id: 879274
Other names: S. sp. HZN7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
fbpC	potA-3	shn_12010	shn_10750	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.405
fbpC	potA-4	shn_12010	shn_16775	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.403
fbpC	potA-5	shn_12010	shn_17225	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.419
fbpC	shn_10755	shn_12010	shn_10755	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
fbpC	shn_10760	shn_12010	shn_10760	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.823
fbpC	shn_10765	shn_12010	shn_10765	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
fbpC	shn_12015	shn_12010	shn_12015	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Potassium transporter Trk; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
fbpC	shn_12020	shn_12010	shn_12020	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
fbpC	shn_12025	shn_12010	shn_12025	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899
fbpC	shn_16765	shn_12010	shn_16765	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
fbpC	shn_16770	shn_12010	shn_16770	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
fbpC	shn_16780	shn_12010	shn_16780	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
fbpC	shn_17210	shn_12010	shn_17210	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
fbpC	shn_17215	shn_12010	shn_17215	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.837
fbpC	shn_17220	shn_12010	shn_17220	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Spermidine/putrecine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.735
potA-3	fbpC	shn_10750	shn_12010	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.405
potA-3	potA-4	shn_10750	shn_16775	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.418
potA-3	potA-5	shn_10750	shn_17225	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.402
potA-3	shn_10755	shn_10750	shn_10755	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
potA-3	shn_10760	shn_10750	shn_10760	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925