STRINGSTRING
hutU-2 hutU-2 shn_12045 shn_12045 shn_11905 shn_11905 shn_11860 shn_11860 shn_11830 shn_11830 shn_11800 shn_11800 shn_11390 shn_11390 shn_11300 shn_11300 shn_11150 shn_11150 shn_11035 shn_11035 shn_10835 shn_10835 shn_10770 shn_10770 shn_10745 shn_10745 katG katG shn_10295 shn_10295 shn_10260 shn_10260 shn_09955 shn_09955 shn_09910 shn_09910 shn_09655 shn_09655 shn_09200 shn_09200 shn_09185 shn_09185 shn_09180 shn_09180 shn_09155 shn_09155 anmK anmK gcvP gcvP gcvH gcvH gcvT gcvT shn_09015 shn_09015 shn_09005 shn_09005 shn_08775 shn_08775 psuG psuG shn_08505 shn_08505 shn_08280 shn_08280 shn_08045 shn_08045 surE surE shn_07890 shn_07890 shn_07760 shn_07760 ilvA ilvA shn_07655 shn_07655 rne rne shn_07245 shn_07245 shn_07130 shn_07130 shn_06955 shn_06955 hutI hutI hutH hutH hutU hutU shn_06905 shn_06905 shn_06875 shn_06875 shn_06850 shn_06850 bpt bpt shn_06445 shn_06445 shn_06345 shn_06345 shn_06180 shn_06180 shn_06175 shn_06175 shn_06170 shn_06170 shn_06165 shn_06165 shn_06050 shn_06050 shn_06045 shn_06045 shn_06000 shn_06000 shn_05905 shn_05905 shn_05780 shn_05780 shn_05775 shn_05775 shn_05770 shn_05770 shn_05685 shn_05685 shn_05465 shn_05465 shn_05310 shn_05310 shn_05095 shn_05095 shn_04690 shn_04690 shn_04600 shn_04600 shn_04430 shn_04430 shn_04365 shn_04365 shn_04315 shn_04315 rnhA rnhA shn_04135 shn_04135 xseB xseB shn_04025 shn_04025 rnhB rnhB shn_03765 shn_03765 shn_03760 shn_03760 shn_03475 shn_03475 shn_03450 shn_03450 shn_03425 shn_03425 shn_03290 shn_03290 shn_03250 shn_03250 shn_03240 shn_03240 shn_03235 shn_03235 shn_03195 shn_03195 shn_03010 shn_03010 shn_02890 shn_02890 shn_02835 shn_02835 shn_02815 shn_02815 shn_02735 shn_02735 shn_02725 shn_02725 edd edd flbT flbT pnp pnp shn_01210 shn_01210 shn_01105 shn_01105 shn_01095 shn_01095 shn_00690 shn_00690 shn_00405 shn_00405 rph rph shn_00025 shn_00025 shn_08445 shn_08445 shn_22355 shn_22355 shn_22345 shn_22345 dut dut shn_21670 shn_21670 shn_21665 shn_21665 shn_21655 shn_21655 shn_21650 shn_21650 xseA xseA shn_21400 shn_21400 deoB deoB shn_21055 shn_21055 shn_21035 shn_21035 shn_21025 shn_21025 slyX slyX shn_20890 shn_20890 shn_20870 shn_20870 shn_20865 shn_20865 shn_20820 shn_20820 shn_20670 shn_20670 shn_20660 shn_20660 shn_20645 shn_20645 shn_20625 shn_20625 allA-2 allA-2 arcA arcA shn_20050 shn_20050 shn_20015 shn_20015 shn_19850 shn_19850 shn_19835 shn_19835 shn_19805 shn_19805 shn_19795 shn_19795 shn_19635 shn_19635 shn_19630 shn_19630 shn_19620 shn_19620 shn_19225 shn_19225 shn_19125 shn_19125 shn_19115 shn_19115 shn_18790 shn_18790 shn_18500 shn_18500 shn_18490 shn_18490 shn_17885 shn_17885 shn_17795 shn_17795 shn_17710 shn_17710 gloB gloB shn_17525 shn_17525 shn_17485 shn_17485 shn_17450 shn_17450 shn_17385 shn_17385 shn_17370 shn_17370 shn_17365 shn_17365 shn_17360 shn_17360 shn_17270 shn_17270 shn_17235 shn_17235 shn_17180 shn_17180 shn_17155 shn_17155 shn_17135 shn_17135 shn_17100 shn_17100 shn_17090 shn_17090 shn_17085 shn_17085 shn_17050 shn_17050 shn_17035 shn_17035 shn_17030 shn_17030 shn_17020 shn_17020 shn_17005 shn_17005 shn_17000 shn_17000 shn_16970 shn_16970 shn_16860 shn_16860 shn_16660 shn_16660 putA putA shn_16380 shn_16380 shn_16310 shn_16310 shn_16305 shn_16305 shn_16300 shn_16300 shn_16295 shn_16295 shn_16285 shn_16285 shn_16280 shn_16280 shn_16275 shn_16275 shn_16255 shn_16255 shn_16235 shn_16235 shn_16100 shn_16100 shn_16090 shn_16090 shn_16085 shn_16085 shn_16080 shn_16080 shn_16075 shn_16075 shn_16070 shn_16070 shn_16065 shn_16065 shn_16060 shn_16060 shn_16045 shn_16045 shn_16040 shn_16040 shn_16000 shn_16000 shn_15895 shn_15895 shn_15865 shn_15865 shn_15565 shn_15565 shn_15545 shn_15545 shn_15530 shn_15530 shn_15460 shn_15460 shn_15440 shn_15440 shn_15410 shn_15410 shn_15390 shn_15390 shn_15350 shn_15350 shn_15300 shn_15300 shn_15070 shn_15070 shn_14755 shn_14755 shn_14725 shn_14725 shn_14720 shn_14720 shn_14710 shn_14710 shn_14590 shn_14590 phnW phnW shn_14520 shn_14520 shn_14500 shn_14500 shn_14430 shn_14430 shn_14415 shn_14415 ureA ureA ureB ureB ureC ureC shn_14120 shn_14120 shn_14110 shn_14110 shn_13520 shn_13520 shn_13410 shn_13410 allA allA shn_13385 shn_13385 shn_13360 shn_13360 glpK glpK ade ade shn_12695 shn_12695 shn_12610 shn_12610 shn_12605 shn_12605 shn_12595 shn_12595 shn_12500 shn_12500 tdh tdh shn_12485 shn_12485 shn_12325 shn_12325 shn_12200 shn_12200 lcdH lcdH shn_12090 shn_12090 shn_12075 shn_12075
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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hutU-2Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (553 aa)
shn_12045Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
shn_11905CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family. (398 aa)
shn_11860Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
shn_11830Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
shn_11800FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
shn_11390DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. (647 aa)
shn_11300N-acetylmuramic acid 6-phosphate etherase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
shn_11150Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
shn_11035Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
shn_10835Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
shn_10770Enamine deaminase RidA; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
shn_10745NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (693 aa)
katGCatalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (724 aa)
shn_10295Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (476 aa)
shn_10260Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
shn_09955Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
shn_09910ABC transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
shn_09655Nucleoside triphosphate pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
shn_092004-hydroxyphenylacetate 3-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
shn_09185XdhC/CoxI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)
shn_09180XdhC/CoxF family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
shn_09155RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. (499 aa)
anmKanhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. (377 aa)
gcvPGlycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (953 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (120 aa)
gcvTGlycine cleavage system protein T; Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
shn_09015DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
shn_09005S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (277 aa)
shn_08775Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
psuGPseudouridine-5-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. (308 aa)
shn_08505Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
shn_08280Lactoylglutathione lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
shn_08045Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
surE5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (256 aa)
shn_07890Deoxyguanosinetriphosphate triphosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dGTPase family. Type 2 subfamily. (406 aa)
shn_07760Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AlaDH/PNT family. (372 aa)
ilvAThreonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (415 aa)
shn_07655TIR protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)
rneRibonuclease; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. (959 aa)
shn_07245Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0173 family. (234 aa)
shn_07130Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
shn_06955Formimidoylglutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
hutIImidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
hutHHistidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (558 aa)
shn_06905Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
shn_06875Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (731 aa)
shn_06850Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (584 aa)
bptArginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. (254 aa)
shn_06445Beta-aryl ether-cleaving protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
shn_06345YicC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
shn_06180Prolyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S33 family. (319 aa)
shn_06175Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
shn_06170Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
shn_06165Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
shn_06050Sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
shn_06045Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
shn_06000Class A beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
shn_05905Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
shn_057803D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (616 aa)
shn_05775Myo-inosose-2 dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
shn_057705-deoxy-glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
shn_05685DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
shn_05465Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
shn_05310Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
shn_05095Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
shn_04690Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
shn_046002,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (262 aa)
shn_04430MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
shn_04365Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)
shn_04315Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
rnhARibonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (148 aa)
shn_04135Ribulose phosphate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (83 aa)
shn_04025Hybrid-cluster NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (222 aa)
shn_037652-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
shn_037602-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
shn_03475Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
shn_03450MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
shn_03425Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)
shn_03290Deaminase; Metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)
shn_03250N-ethylammeline chlorohydrolase; Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)
shn_03240Cytosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
shn_03235Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
shn_03195ANTAR domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
shn_03010Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
shn_02890phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
shn_02835Acyl CoA:acetate/3-ketoacid CoA transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family. (523 aa)
shn_02815Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
shn_02735hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
shn_02725acyl-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family. (395 aa)
eddPhosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (606 aa)
flbTFlagellar biosynthesis repressor FlbT; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation. (148 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (713 aa)
shn_01210Molybdenum cofactor biosysynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)
shn_01105hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
shn_01095Enamine deaminase RidA; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
shn_006903-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (735 aa)
shn_00405Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
rphRibonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (238 aa)
shn_00025Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (214 aa)
shn_08445Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
shn_22355Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (401 aa)
shn_22345Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
dutDeoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. (157 aa)
shn_21670Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
shn_21665Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
shn_216553-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
shn_21650Pca operon transcription factor PcaQ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (307 aa)
xseAExodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (528 aa)
shn_21400DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
deoBPhosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (409 aa)
shn_21055Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. (322 aa)
shn_21035Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. (257 aa)
shn_21025Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (130 aa)
slyXHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SlyX family. (74 aa)
shn_20890Transposase; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
shn_20870Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa)
shn_20865Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
shn_20820Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
shn_206702-hydroxy-3-oxopropionate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
shn_20660Glyoxylate carboligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (594 aa)
shn_20645Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. (446 aa)
shn_20625Xanthine dehydrogenase accessory protein XdhC; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
allA-2Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. (161 aa)
arcAArginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
shn_20050Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
shn_20015Catalyzes the retro-aldol cleavage of 2-keto-3-deoxy-L-rhamnonate to pyruvate and lactaldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (266 aa)
shn_19850Heparinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa)
shn_19835NAD-glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1593 aa)
shn_19805Phosphatidic acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
shn_19795Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
shn_19635Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
shn_19630Amino acid deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
shn_19620Deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
shn_19225Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
shn_19125Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
shn_19115Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
shn_18790Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
shn_18500Isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (374 aa)
shn_18490Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)
shn_17885Bifunctional metallophosphatase/5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family. (483 aa)
shn_177953-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
shn_17710Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. (183 aa)
gloBHydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (254 aa)
shn_17525Myo-inosose-2 dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
shn_174852,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (271 aa)
shn_174503D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (613 aa)
shn_17385Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa)
shn_17370Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
shn_17365Metapyrocatechase; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
shn_17360Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
shn_17270Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (367 aa)
shn_17235Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (236 aa)
shn_17180Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
shn_17155Enamine deaminase RidA; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
shn_17135Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
shn_17100Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
shn_170906-chlorohydroxyquinol-1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
shn_170852,4-dichlorophenol 6-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (587 aa)
shn_170506-chlorohydroxyquinol-1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
shn_17035DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
shn_17030Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (625 aa)
shn_17020Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
shn_17005Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
shn_17000Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)
shn_16970FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
shn_16860Mandelate racemase/muconate lactonizing protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (368 aa)
shn_16660Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (358 aa)
putADelta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1228 aa)
shn_16380Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
shn_163102,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (268 aa)
shn_163052-oxo-hepta-3-ene-1,7-dioic acid hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
shn_163002-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
shn_162953,4-dihydroxyphenylacetate 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
shn_162855-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
shn_16280Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
shn_16275Pyoverdin chromophore biosynthetic protein pvcC; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
shn_16255Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
shn_16235Glycine oxidase ThiO; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
shn_16100Phenylacetic acid degradation operon negative regulatory protein PaaX; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
shn_160901,2-phenylacetyl-CoA epoxidase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
shn_160851,2-phenylacetyl-CoA epoxidase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
shn_16080phenylacetate-CoA oxygenase subunit PaaI; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
shn_16075phenylacetate-CoA oxygenase subunit PaaJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
shn_16070Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
shn_16065Phenylacetic acid catabolic; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
shn_16060Phenylacetic acid degradation bifunctional protein PaaZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (685 aa)
shn_16045phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (436 aa)
shn_16040Phenylacetic acid degradation protein PaaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
shn_160003-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (686 aa)
shn_15895Acyl CoA:acetate/3-ketoacid CoA transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family. (537 aa)
shn_15865Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
shn_15565Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
shn_15545Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
shn_15530Glycogen debranching enzyme GlgX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family. (657 aa)
shn_15460Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
shn_15440Galactonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (509 aa)
shn_15410N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
shn_15390Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (348 aa)
shn_15350Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
shn_15300Multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family. (650 aa)
shn_15070Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
shn_147553-oxoadipate enol-lactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
shn_14725Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)
shn_14720Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)
shn_14710FAD/NAD(P)-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
shn_14590Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
phnW2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (396 aa)
shn_145202-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
shn_14500Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
shn_14430Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
shn_14415Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
ureAUrease subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease gamma subunit family. (100 aa)
ureBUrease subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease beta subunit family. (101 aa)
ureCUrease subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (568 aa)
shn_14120Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
shn_14110Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
shn_13520Ferredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
shn_13410D-amino-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
allAUreidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. (164 aa)
shn_13385Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. (435 aa)
shn_13360Xanthine dehydrogenase accessory protein XdhC; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (497 aa)
adeAdenine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. (564 aa)
shn_12695Alkene reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
shn_12610Pentachlorophenol monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
shn_12605Class D beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
shn_12595Iditol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
shn_12500Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
tdhL-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. (345 aa)
shn_12485Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)
shn_12325Cytosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
shn_12200Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
lcdH3-hydroxyacyl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. (497 aa)
shn_12090NADPH dependent quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
shn_12075Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (512 aa)
Your Current Organism:
Shinella sp. HZN7
NCBI taxonomy Id: 879274
Other names: S. sp. HZN7
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