STRINGSTRING
shn_03690 shn_03690 shn_03695 shn_03695 shn_05770 shn_05770 shn_05775 shn_05775 shn_05780 shn_05780 shn_08635 shn_08635 glpK glpK cysQ cysQ shn_14720 shn_14720 shn_15185 shn_15185 shn_15405 shn_15405 shn_16820 shn_16820 shn_17450 shn_17450 shn_17525 shn_17525
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
shn_036903'(2'),5'-bisphosphate nucleotidase CysQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
shn_03695Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (78 aa)
shn_057705-deoxy-glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
shn_05775Myo-inosose-2 dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
shn_057803D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (616 aa)
shn_08635Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (497 aa)
cysQ3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. (268 aa)
shn_14720Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)
shn_15185Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily. (266 aa)
shn_15405Histidinol-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
shn_16820Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
shn_174503D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (613 aa)
shn_17525Myo-inosose-2 dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
Your Current Organism:
Shinella sp. HZN7
NCBI taxonomy Id: 879274
Other names: S. sp. HZN7
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