STRINGSTRING
shn_10365 shn_10365 shn_16790 shn_16790 shn_13420 shn_13420 shn_03725 shn_03725 shn_05030 shn_05030 shn_09070 shn_09070 shn_09775 shn_09775
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
shn_10365Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
shn_16790Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (396 aa)
shn_13420Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1213 aa)
shn_03725Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
shn_05030Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (766 aa)
shn_09070Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (621 aa)
shn_09775Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (870 aa)
Your Current Organism:
Shinella sp. HZN7
NCBI taxonomy Id: 879274
Other names: S. sp. HZN7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.