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potA-4 potA-4 shn_16715 shn_16715 shn_16680 shn_16680 shn_16625 shn_16625 shn_16465 shn_16465 shn_16415 shn_16415 shn_16200 shn_16200 shn_16145 shn_16145 shn_16115 shn_16115 shn_16005 shn_16005 shn_15960 shn_15960 shn_15930 shn_15930 shn_15850 shn_15850 shn_15770 shn_15770 shn_15165 shn_15165 glnQ glnQ shn_14680 shn_14680 shn_14615 shn_14615 fbpC-2 fbpC-2 shn_14450 shn_14450 shn_14390 shn_14390 shn_14285 shn_14285 hmuV hmuV rbsA-3 rbsA-3 shn_13490 shn_13490 shn_13235 shn_13235 shn_13000 shn_13000 shn_12985 shn_12985 shn_12160 shn_12160 shn_12125 shn_12125 fbpC fbpC shn_11995 shn_11995 shn_11885 shn_11885 shn_11275 shn_11275 shn_11220 shn_11220 shn_10860 shn_10860 potA-3 potA-3 shn_10695 shn_10695 shn_10505 shn_10505 shn_10270 shn_10270 znuC znuC shn_10150 shn_10150 shn_09865 shn_09865 shn_09535 shn_09535 shn_09480 shn_09480 shn_09095 shn_09095 uvrA uvrA shn_07920 shn_07920 lolD lolD shn_06425 shn_06425 shn_19395 shn_19395 ccmA ccmA ndvA ndvA shn_19650 shn_19650 shn_19675 shn_19675 shn_20040 shn_20040 shn_20440 shn_20440 shn_20725 shn_20725 glnQ-2 glnQ-2 shn_21010 shn_21010 shn_21150 shn_21150 shn_21185 shn_21185 shn_21265 shn_21265 shn_21270 shn_21270 shn_21695 shn_21695 ugpC ugpC shn_06210 shn_06210 shn_04885 shn_04885 shn_04755 shn_04755 shn_04610 shn_04610 shn_04560 shn_04560 cysA cysA shn_03225 shn_03225 shn_03170 shn_03170 shn_03135 shn_03135 shn_03070 shn_03070 shn_02935 shn_02935 potA-2 potA-2 shn_02690 shn_02690 rbsA-2 rbsA-2 shn_02610 shn_02610 shn_02590 shn_02590 modC modC dppD dppD potA potA shn_01805 shn_01805 rbsA rbsA shn_00835 shn_00835 pstB pstB shn_00065 shn_00065 shn_19260 shn_19260 thiQ thiQ shn_18965 shn_18965 shn_17775 shn_17775 ftsE ftsE rbsA-4 rbsA-4 shn_17395 shn_17395 shn_17330 shn_17330 phnC phnC shn_17255 shn_17255 potA-5 potA-5 shn_17175 shn_17175 shn_17125 shn_17125 shn_17070 shn_17070 shn_16980 shn_16980 shn_16905 shn_16905 shn_16830 shn_16830 shn_16725 shn_16725
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
potA-4Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (369 aa)
shn_16715Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (354 aa)
shn_16680Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
shn_16625ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
shn_16465ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
shn_16415Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (513 aa)
shn_16200ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
shn_16145ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
shn_16115Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (538 aa)
shn_16005ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
shn_15960Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
shn_15930Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (371 aa)
shn_15850Manganese/iron transporter ATP-binding protein; With SitACD is involved in the transport of manganese and iron; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
shn_15770ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (508 aa)
shn_15165ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (607 aa)
glnQSimilar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
shn_14680Transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (354 aa)
shn_14615ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (360 aa)
fbpC-2Amino acid ABC transporter substrate-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (391 aa)
shn_14450ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
shn_14390ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
shn_14285Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
hmuVHeme ABC transporter ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (262 aa)
rbsA-3D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (512 aa)
shn_13490ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)
shn_13235Choline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
shn_13000Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (617 aa)
shn_12985Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (622 aa)
shn_12160Polyamine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (331 aa)
shn_12125ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (543 aa)
fbpCSpermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (359 aa)
shn_11995Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (353 aa)
shn_11885Energy-dependent translational throttle protein EttA; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)
shn_11275Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (333 aa)
shn_11220Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (364 aa)
shn_10860Ferrichrome ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
potA-3Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (363 aa)
shn_10695ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (343 aa)
shn_10505Proline/glycine betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
shn_10270ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (360 aa)
znuCZinc ABC transporter ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (309 aa)
shn_10150Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
shn_09865ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
shn_09535ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)
shn_09480ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
shn_09095Fe-S cluster assembly ATPase SufC; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (972 aa)
shn_07920Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (367 aa)
lolDABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (228 aa)
shn_06425Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (628 aa)
shn_19395ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
ccmAHeme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (214 aa)
ndvACyclic beta-1,2-glucan ABC transporter; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (585 aa)
shn_19650ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)
shn_19675Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)
shn_20040ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (517 aa)
shn_20440Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (928 aa)
shn_20725ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (601 aa)
glnQ-2Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
shn_21010Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)
shn_21150Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (544 aa)
shn_21185ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)
shn_21265Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (347 aa)
shn_21270Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (331 aa)
shn_21695Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
ugpCGlycerol-3-phosphate transporter ATP-binding subunit; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (372 aa)
shn_06210Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (631 aa)
shn_04885Protease/lipase ABC transporter permease/ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)
shn_04755Manganese ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
shn_04610ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (351 aa)
shn_04560Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (333 aa)
cysASulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (350 aa)
shn_03225Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
shn_03170Chemotaxis protein; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (558 aa)
shn_03135Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (559 aa)
shn_03070Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)
shn_02935With GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (600 aa)
potA-2ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (355 aa)
shn_02690Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (921 aa)
rbsA-2D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (513 aa)
shn_02610Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
shn_02590Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
modCMolybdenum ABC transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (357 aa)
dppDDppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
potAABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (380 aa)
shn_01805ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (363 aa)
rbsAD-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (498 aa)
shn_00835Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
pstBPhosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (271 aa)
shn_00065LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
shn_19260ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
thiQThiamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. (239 aa)
shn_18965Elongation factor 3; Derived by automated computational analysis using gene prediction method: Protein Homology. (608 aa)
shn_17775Sulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family. (340 aa)
ftsECell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (219 aa)
rbsA-4D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (513 aa)
shn_17395ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
shn_17330Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (361 aa)
phnCPhosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (250 aa)
shn_17255Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (357 aa)
potA-5Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (374 aa)
shn_17175Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (365 aa)
shn_17125Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
shn_17070ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
shn_16980Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
shn_16905Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (360 aa)
shn_16830Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (332 aa)
shn_16725Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (267 aa)
Your Current Organism:
Shinella sp. HZN7
NCBI taxonomy Id: 879274
Other names: S. sp. HZN7
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