STRINGSTRING
shn_21260 shn_21260 shn_14690 shn_14690 shn_21155 shn_21155 shn_20855 shn_20855 shn_20850 shn_20850 shn_19235 shn_19235 shn_19020 shn_19020 shn_19015 shn_19015 shn_18835 shn_18835 shn_17785 shn_17785 shn_17780 shn_17780 shn_17340 shn_17340 shn_17335 shn_17335 shn_17290 shn_17290 shn_17285 shn_17285 shn_17250 shn_17250 shn_17245 shn_17245 shn_17215 shn_17215 shn_17210 shn_17210 shn_17190 shn_17190 shn_17185 shn_17185 shn_17130 shn_17130 shn_16990 shn_16990 shn_16985 shn_16985 shn_16915 shn_16915 shn_16910 shn_16910 shn_16870 shn_16870 shn_16865 shn_16865 shn_16770 shn_16770 shn_16765 shn_16765 shn_16735 shn_16735 shn_16730 shn_16730 shn_16705 shn_16705 shn_16700 shn_16700 shn_16675 shn_16675 shn_16670 shn_16670 shn_16640 shn_16640 shn_16635 shn_16635 shn_16140 shn_16140 shn_16125 shn_16125 shn_16120 shn_16120 shn_15965 shn_15965 shn_15955 shn_15955 shn_15925 shn_15925 shn_15920 shn_15920 shn_14740 shn_14740 shn_14685 shn_14685 shn_14630 shn_14630 shn_14625 shn_14625 shn_14550 shn_14550 shn_14300 shn_14300 shn_14295 shn_14295 shn_14215 shn_14215 shn_14210 shn_14210 shn_13230 shn_13230 shn_12335 shn_12335 shn_12330 shn_12330 shn_12170 shn_12170 shn_12165 shn_12165 shn_12120 shn_12120 shn_12025 shn_12025 shn_12020 shn_12020 shn_11990 shn_11990 shn_11985 shn_11985 shn_11290 shn_11290 shn_11285 shn_11285 shn_11215 shn_11215 shn_11210 shn_11210 shn_10760 shn_10760 shn_10755 shn_10755 shn_10700 shn_10700 shn_10500 shn_10500 shn_10280 shn_10280 shn_10275 shn_10275 shn_10100 shn_10100 shn_10095 shn_10095 shn_09475 shn_09475 shn_09470 shn_09470 shn_05670 shn_05670 shn_04625 shn_04625 shn_04620 shn_04620 shn_04555 shn_04555 shn_04550 shn_04550 shn_03280 shn_03280 shn_03275 shn_03275 shn_03220 shn_03220 shn_03215 shn_03215 shn_03190 shn_03190 shn_03185 shn_03185 shn_03130 shn_03130 shn_03125 shn_03125 shn_02945 shn_02945 shn_02940 shn_02940 shn_02760 shn_02760 shn_02755 shn_02755 shn_02585 shn_02585 shn_02580 shn_02580 shn_02080 shn_02080 shn_02000 shn_02000 shn_01995 shn_01995 shn_01900 shn_01900 shn_01885 shn_01885 shn_01880 shn_01880 shn_01795 shn_01795 shn_01790 shn_01790 shn_00850 shn_00850 shn_00845 shn_00845 shn_00615 shn_00615 shn_00535 shn_00535 shn_00530 shn_00530 ugpE ugpE shn_22255 shn_22255 shn_21255 shn_21255 shn_21160 shn_21160
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
shn_21260Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
shn_14690ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
shn_21155Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
shn_20855Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
shn_20850ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
shn_19235Thiamine/thiamine pyrophosphate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa)
shn_19020ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
shn_19015Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
shn_18835Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
shn_17785Sulfate ABC transporter permease subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (273 aa)
shn_17780Sulfate ABC transporter permease subunit CysW; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
shn_17340ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
shn_17335Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
shn_17290Phosphonate ABC transporter, permease protein PhnE; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (275 aa)
shn_17285Phosphonate ABC transporter, permease protein PhnE; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
shn_17250Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
shn_17245ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
shn_17215Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
shn_17210Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
shn_17190Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
shn_17185Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
shn_17130ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
shn_16990ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
shn_16985ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
shn_16915ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
shn_16910ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
shn_16870Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
shn_16865Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
shn_16770Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
shn_16765ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
shn_16735Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
shn_16730Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
shn_16705Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
shn_16700Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
shn_16675Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (263 aa)
shn_16670Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
shn_16640Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
shn_16635D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
shn_16140Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
shn_16125ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
shn_16120Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
shn_15965ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
shn_15955ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
shn_15925Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
shn_15920ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
shn_14740Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
shn_14685ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
shn_14630ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
shn_14625ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
shn_14550Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (669 aa)
shn_14300ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
shn_14295ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
shn_14215Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
shn_14210Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
shn_13230Choline ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
shn_12335Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
shn_12330Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
shn_12170Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
shn_12165Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
shn_12120ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
shn_12025ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
shn_12020ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
shn_11990Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
shn_11985Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
shn_11290ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
shn_11285Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
shn_11215Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
shn_11210Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
shn_10760ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
shn_10755ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
shn_10700ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (564 aa)
shn_10500ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
shn_10280Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
shn_10275Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
shn_10100Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
shn_10095ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
shn_09475Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
shn_09470Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
shn_05670ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
shn_04625ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
shn_04620ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
shn_04555Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
shn_04550Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
shn_03280Sulfate ABC transporter permease subunit CysW; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
shn_03275Sulfate ABC transporter permease subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (288 aa)
shn_03220ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
shn_03215ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
shn_03190Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
shn_03185Glutathione ABC transporter permease GsiC; With GsiABD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
shn_03130Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
shn_03125Peptidase C45; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
shn_02945Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
shn_02940Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
shn_02760ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
shn_02755ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
shn_02585Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
shn_02580ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
shn_02080Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (233 aa)
shn_02000Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
shn_01995Peptide ABC transporter permease; Transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
shn_01900Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
shn_01885Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
shn_01880Putrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
shn_01795Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
shn_01790Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
shn_00850ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
shn_00845ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
shn_00615Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (551 aa)
shn_00535Phosphate ABC transporter, permease protein PstA; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
shn_00530Phosphate ABC transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (494 aa)
ugpEGlycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (280 aa)
shn_22255Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
shn_21255ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
shn_21160Microcin ABC transporter permease; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
Your Current Organism:
Shinella sp. HZN7
NCBI taxonomy Id: 879274
Other names: S. sp. HZN7
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