(9 nodes) NADP oxidoreductase coenzyme F420-dependent network (Shinella sp. HZN7)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	shn_08045	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
	shn_10295	Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (476 aa)
	proC	Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (272 aa)
	shn_13560	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
	shn_16945	Catalyzes the formation of L-proline from pyrroline-5-carboxylate; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	shn_17460	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	shn_17700	Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
	shn_19200	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	proC-2	Hypothetical protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (262 aa)

Your Current Organism:

Shinella sp. HZN7

NCBI taxonomy Id: 879274
Other names: S. sp. HZN7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
proC	proC-2	shn_12845	shn_21595	Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.	Hypothetical protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.	0.927
proC	shn_16945	shn_12845	shn_16945	Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.	Catalyzes the formation of L-proline from pyrroline-5-carboxylate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
proC-2	proC	shn_21595	shn_12845	Hypothetical protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.	Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.	0.927
proC-2	shn_16945	shn_21595	shn_16945	Hypothetical protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.	Catalyzes the formation of L-proline from pyrroline-5-carboxylate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
shn_13560	shn_17460	shn_13560	shn_17460	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
shn_16945	proC	shn_16945	shn_12845	Catalyzes the formation of L-proline from pyrroline-5-carboxylate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.	0.900
shn_16945	proC-2	shn_16945	shn_21595	Catalyzes the formation of L-proline from pyrroline-5-carboxylate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.	0.905
shn_17460	shn_13560	shn_17460	shn_13560	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905