STRINGSTRING
APF17792.1 APF17792.1 mraZ mraZ rsmH rsmH APF17911.1 APF17911.1 ftsI ftsI APF17913.1 APF17913.1 murE murE murF murF mraY mraY murD murD ftsW ftsW murG murG murC murC ftsQ ftsQ ftsA ftsA ftsZ ftsZ APF17938.1 APF17938.1 ddl ddl APF18377.1 APF18377.1 APF18827.1 APF18827.1 APF19234.1 APF19234.1 APF19296.1 APF19296.1 murB murB murA murA APF19715.1 APF19715.1 dmpA dmpA APF19717.1 APF19717.1 APF20035.1 APF20035.1 rodA rodA Cabys_451 Cabys_451 Cabys_452 Cabys_452 Cabys_453 Cabys_453 Cabys_454 Cabys_454 Cabys_591 Cabys_591 Cabys_743 Cabys_743
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APF17792.1Hypothetical protein. (391 aa)
mraZmraZ MraZ protein; Belongs to the MraZ family. (159 aa)
rsmHrsmH 16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (310 aa)
APF17911.1Hypothetical protein. (125 aa)
ftsIPeptidoglycan synthetase FtsI. (663 aa)
APF17913.1Hypothetical protein. (39 aa)
murEmurE UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (488 aa)
murFUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (450 aa)
mraYmraY Phospho-N-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (367 aa)
murDmurD UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (448 aa)
ftsWCell division protein FtsW; Belongs to the SEDS family. (386 aa)
murGmurG UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (377 aa)
murCmurC UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (457 aa)
ftsQCell division septal protein FtsQ; Essential cell division protein. (238 aa)
ftsACell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. (408 aa)
ftsZftsZ cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (409 aa)
APF17938.1Peptidase family M23. (315 aa)
ddlDdl D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (334 aa)
APF18377.1UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase. (361 aa)
APF18827.1UDP-N-acetylmuramyl pentapeptide synthase. (390 aa)
APF19234.1L-alanine dehydrogenase. (374 aa)
APF19296.1Protein of unknown function (DUF1295). (188 aa)
murBmurB UDP-N-acetylmuramate dehydrogenase; Cell wall formation. (333 aa)
murAmurA UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (419 aa)
APF19715.1D-alanine transaminase. (281 aa)
dmpAL-aminopeptidase DmpA, Serine peptidase, MEROPS family S58. (381 aa)
APF19717.1Hypothetical protein. (49 aa)
APF20035.1Tetratricopeptide repeat-containing protein. (743 aa)
rodARod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. (407 aa)
Cabys_451Peptidoglycan glycosyltransferase. (620 aa)
Cabys_452Rod shape-determining protein MreD. (162 aa)
Cabys_453Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (269 aa)
Cabys_454Rod shape-determining protein MreB. (344 aa)
Cabys_591Penicillin-binding protein 1A. (722 aa)
Cabys_743Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (371 aa)
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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